RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 OR1L3Q8NH93 324 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 CLEC4DQ8WXI8 215 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 PBX4Q9BYU1 374 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 PARP12Q9H0J9 701 aaKnown RBP10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 TMEM98Q9Y2Y6 226 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 RLFQ13129 1914 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 SLC31A1O15431 190 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 RAD1O60671 282 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 HSD17B7P56937 341 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 IL10RBQ08334 325 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 MICAQ29983 383 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 EXD3Q8N9H8 876 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 GREB1Q4ZG55 1949 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 ZNF727A8MUV8 499 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 HSPB6O14558 160 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 AK1P00568 194 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 CDK5R2Q13319 367 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 KEAP1Q14145 624 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 NUP43Q8NFH3 380 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 RPL17P18621 184 aaKnown RBP10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 ANKRD60Q9BZ19 345 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 SPG11Q96JI7 2443 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 FBLL1A6NHQ2 334 aaKnown RBP10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 CNR2P34972 360 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 DHRS7BQ6IAN0 325 aaPredicted RBP10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 HAPLN3Q96S86 360 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 ITGAMP11215 1152 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 IL2RGP31785 369 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 FAM124BQ9H5Z6 455 aaPredicted RBP10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 PITPNC1Q9UKF7 332 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 A0A1W2PPQ1 181 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 TAAR5O14804 337 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 MRPL21Q7Z2W9 205 aaKnown RBP10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 TRAPPC2LQ9UL33 140 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 TMEM212A6NML5 194 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 BET1O15155 118 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 CRYABP02511 175 aaKnown RBP10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 OR5AL1P0C617 328 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 MLF2Q15773 248 aaPredicted RBP10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 SOWAHAQ2M3V2 549 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 RNF111Q6ZNA4 994 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 OR51L1Q8NGJ5 315 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 ZNF566Q969W8 418 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 SEC22AQ96IW7 307 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 WASHC3Q9Y3C0 194 aa10.42□□□□□ -0.74
HDGFL3-201ENST00000299633 NDUFS8O00217 210 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 OR2F2O95006 317 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 NFATC1O95644 943 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 OR2F1Q13607 317 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 CLEC20AQ6ZU45 233 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 NUDT10Q8NFP7 164 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 NUDT11Q96G61 164 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 SYT17Q9BSW7 474 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 GVINP1Q7Z2Y8 2422 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 LOC102725191A0A1B0GVB3 256 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 CBX7O95931 251 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 OR10A3P58181 314 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 PKIAP61925 76 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 ZNF787Q6DD87 383 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 ZNF66Q6ZN08 573 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 UBQLN3Q9H347 655 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 ARNT2Q9HBZ2 717 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 SNED1Q8TER0 1413 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 SLC10A6Q3KNW5 377 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 OR8G2PQ6IF36 304 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 DTWD2Q8NBA8 298 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 RNF11Q9Y3C5 154 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 DDAH2O95865 285 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 RAF1P04049 648 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 SYPL2Q5VXT5 272 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 PRICKLE2Q7Z3G6 844 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 C6orf201Q7Z4U5 140 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 GPR32P1Q8NGA4 272 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 OR52P1PQ8NH57 321 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 MAP1LC3CQ9BXW4 147 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 CSAG2Q9Y5P2 127 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 NUDT21O43809 227 aaKnown RBP10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 SRMP19623 302 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 MMP11P24347 488 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 WDR5BQ86VZ2 330 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 SLC35G3Q8N808 338 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 OR6S1Q8NH40 331 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 DERL2Q9GZP9 239 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 P4HTMQ9NXG6 502 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 OSGIN1Q9UJX0 560 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 IL3RAP26951 378 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 CEBPDP49716 269 aaPredicted RBP10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 UQCC3Q6UW78 93 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 GDF2Q9UK05 429 aaPredicted RBP10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 CXCL14O95715 111 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 CD80P33681 288 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 C10orf126Q8N4M7 172 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 OR52L2PQ8NGH6 319 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 CD207Q9UJ71 328 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 ATXN1LP0C7T5 689 aaKnown RBP10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 TIMP2P16035 220 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 SMPD1P17405 629 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 DUSP1P28562 367 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 CRABP1P29762 137 aa10.41□□□□□ -0.74
HDGFL3-201ENST00000299633 OR4D2P58180 307 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms