RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 FGF13Q92913 245 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 MARC2Q969Z3 335 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 SLC22A18Q96BI1 424 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 CFHR5Q9BXR6 569 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 CHST6Q9GZX3 395 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 ALX4Q9H161 411 aaPredicted RBP9.28□□□□□ -0.92
CCDC36-201ENST00000296449 TMEM138Q9NPI0 162 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 STEAP1Q9UHE8 339 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 ZNF337Q9Y3M9 751 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 A0A087WUJ7 227 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 A0A1W2PQU0 124 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 DNASE2O00115 360 aaPredicted RBP9.27□□□□□ -0.93
CCDC36-201ENST00000296449 SIGLEC5O15389 551 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 KDM4BO94953 1096 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 PRKACAP17612 351 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 MST1P26927 711 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 CFPP27918 469 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 RPS21P63220 83 aaKnown RBP9.27□□□□□ -0.93
CCDC36-201ENST00000296449 SIGLEC14Q08ET2 396 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 COL19A1Q14993 1142 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 PSRC1Q6PGN9 363 aaPredicted RBP9.27□□□□□ -0.93
CCDC36-201ENST00000296449 C11orf88Q6PI97 169 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 FIGLAQ6QHK4 219 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 C17orf107Q6ZR85 190 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 ZNF550Q7Z398 422 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 KRT77Q7Z794 578 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 BIVMQ86UB2 503 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 ZNF227Q86WZ6 799 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 OR8K3Q8NH51 312 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 SPPL3Q8TCT6 385 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 ANKRD9Q96BM1 317 aaPredicted RBP9.27□□□□□ -0.93
CCDC36-201ENST00000296449 SLC17A9Q9BYT1 436 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 APMAPQ9HDC9 416 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 DPP7Q9UHL4 492 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 SPACA6W5XKT8 324 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 SPTBP11277 2137 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 TRBV5-7A0A0A0MS05 114 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 PRSS38A1L453 326 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 MEIS3P1A6NDR6 274 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 RFPL4AA6NLU0 287 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 OR4C45A6NMZ5 311 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 MPTX1A8MV57 137 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 GRXCR1A8MXD5 290 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 RFPL4AL1F8VTS6 287 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 H0YGG7 62 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 ABCD4O14678 606 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 CTAG2O75638 210 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 CDC123O75794 336 aaPredicted RBP9.27□□□□□ -0.93
CCDC36-201ENST00000296449 KAT7O95251 611 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 MELTFP08582 738 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 UBBP0CG47 229 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 UBCP0CG48 685 aaKnown RBP9.27□□□□□ -0.93
CCDC36-201ENST00000296449 AKAIN1P0CW23 69 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 GTF2F2P13984 249 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 C5AR1P21730 350 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 CSF2RBP32927 897 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 CTNNB1P35222 781 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 ARF3P61204 181 aaPredicted RBP9.27□□□□□ -0.93
CCDC36-201ENST00000296449 RPS27AP62979 156 aaKnown RBP9.27□□□□□ -0.93
CCDC36-201ENST00000296449 UBA52P62987 128 aaKnown RBP9.27□□□□□ -0.93
CCDC36-201ENST00000296449 CTAG1AP78358 180 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 ZNF169Q14929 603 aaPredicted RBP9.27□□□□□ -0.93
CCDC36-201ENST00000296449 KIR2DS3Q14952 304 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 NKAIN2Q5VXU1 208 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 ZNF595Q8IYB9 648 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 EXD3Q8N9H8 876 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 PXT1Q8NFP0 134 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 OR51D1Q8NGF3 324 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 OR5T2Q8NGG2 359 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 OR51A4Q8NGJ6 313 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 TMEM106AQ96A25 262 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 SCARF2Q96GP6 870 aaPredicted RBP9.27□□□□□ -0.93
CCDC36-201ENST00000296449 ADAD1Q96M93 576 aaKnown RBP9.27□□□□□ -0.93
CCDC36-201ENST00000296449 OR2M4Q96R27 311 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 GPX7Q96SL4 187 aaPredicted RBP9.27□□□□□ -0.93
CCDC36-201ENST00000296449 ZNF416Q9BWM5 594 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 PBX4Q9BYU1 374 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 RNF208Q9H0X6 261 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 PCDHB16Q9NRJ7 776 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.27□□□□□ -0.93
CCDC36-201ENST00000296449 CYB5R1Q9UHQ9 305 aa9.27□□□□□ -0.93
CCDC36-201ENST00000296449 TBC1D3IA0A087WXS9 549 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 TRAV14DV4A0A0A6YYC5 116 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 H3BSH0 61 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 PRAMEF2O60811 474 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 ZNF432O94892 652 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 ADH1BP00325 375 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 CD3DP04234 171 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 MGMTP16455 207 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 S1PR1P21453 382 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 ADPRHP54922 357 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 PRPS1P60891 318 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 SSBP1Q04837 148 aaKnown RBP9.26□□□□□ -0.93
CCDC36-201ENST00000296449 ZNF141Q15928 474 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 C4orf46Q504U0 113 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 CLRN3Q8NCR9 226 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 DUSP19Q8WTR2 217 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 DVL3Q92997 716 aaPredicted RBP9.26□□□□□ -0.93
CCDC36-201ENST00000296449 ASB16Q96NS5 453 aa9.26□□□□□ -0.93
CCDC36-201ENST00000296449 LMF2Q9BU23 707 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms