RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 ORC5O43913 435 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 ITGA10O75578 1167 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 SCRG1O75711 98 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 PLGP00747 810 aaPredicted RBP21.67■■□□□ 1.06
TRIM54-201ENST00000296098 BAIAP2L2Q6UXY1 529 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 C16orf47Q6ZP98 133 aaPredicted RBP21.67■■□□□ 1.06
TRIM54-201ENST00000296098 NFAM1Q8NET5 270 aaPredicted RBP21.67■■□□□ 1.06
TRIM54-201ENST00000296098 OR5AK2Q8NH90 309 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 CEP76Q8TAP6 659 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 ORAI1Q96D31 301 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 MAP6Q96JE9 813 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 TSPAN10Q9H1Z9 355 aaPredicted RBP21.67■■□□□ 1.06
TRIM54-201ENST00000296098 U3KQA8 63 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 CABIN1Q9Y6J0 2220 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 CPAMD8Q8IZJ3 1885 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 ALOX12BO75342 701 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 SLC43A1O75387 559 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 AHSA1O95433 338 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 AHCYP23526 432 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 RPL27P61353 136 aaKnown RBP21.66■■□□□ 1.06
TRIM54-201ENST00000296098 CCL7P80098 99 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 PITPNAQ00169 270 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 ACKR1Q16570 336 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 UBE2NLQ5JXB2 153 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 DPY19L4Q7Z388 723 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 ZNF519Q8TB69 540 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 STK35Q8TDR2 534 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 ITFG2Q969R8 447 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 DMRTB1Q96MA1 342 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 MESP1Q9BRJ9 268 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 OR2B2Q9GZK3 357 aa21.66■■□□□ 1.06
TRIM54-201ENST00000296098 A0A1B0GTQ1 180 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 A0A1W2PQM1 296 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 PHYHO14832 338 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 ALOX5APP20292 161 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 EGR3Q06889 387 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 C5orf46Q6UWT4 87 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 CAPSLQ8WWF8 208 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 CREB3L1Q96BA8 519 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 SNX18Q96RF0 628 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 GFI1Q99684 422 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 ABCG5Q9H222 651 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 FRRS1LQ9P0K9 344 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 RARRES3Q9UL19 164 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 RBMX2Q9Y388 322 aaKnown RBP21.65■■□□□ 1.06
TRIM54-201ENST00000296098 CACNA1EQ15878 2313 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 A0A087WV48 116 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 PRSS37A4D1T9 235 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 DXOO77932 396 aaKnown RBP21.65■■□□□ 1.06
TRIM54-201ENST00000296098 GPANK1O95872 356 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 MAPK3P27361 379 aaPredicted RBP21.65■■□□□ 1.06
TRIM54-201ENST00000296098 SLC6A1P30531 599 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 FBXW4P57775 412 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 Q499Y3 187 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 PWWP2BQ6NUJ5 590 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 SAP25Q8TEE9 199 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 TMEM234Q8WY98 164 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 CMTM3Q96MX0 182 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 CDX2Q99626 313 aaPredicted RBP21.65■■□□□ 1.06
TRIM54-201ENST00000296098 IER2Q9BTL4 223 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 OR11A1Q9GZK7 315 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 FKBP7Q9Y680 259 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 CACNG2Q9Y698 323 aa21.65■■□□□ 1.06
TRIM54-201ENST00000296098 IGHV5-10-1A0A0J9YXX1 117 aa21.64■■□□□ 1.05
TRIM54-201ENST00000296098 AIPO00170 330 aa21.64■■□□□ 1.05
TRIM54-201ENST00000296098 SIGLEC6O43699 453 aa21.64■■□□□ 1.05
TRIM54-201ENST00000296098 OR6A2O95222 327 aa21.64■■□□□ 1.05
TRIM54-201ENST00000296098 MAGEB1P43366 347 aa21.64■■□□□ 1.05
TRIM54-201ENST00000296098 DCDP81605 110 aaKnown RBP21.64■■□□□ 1.05
TRIM54-201ENST00000296098 HES5Q5TA89 166 aa21.64■■□□□ 1.05
TRIM54-201ENST00000296098 UBALD2Q8IYN6 164 aa21.64■■□□□ 1.05
TRIM54-201ENST00000296098 NUBPLQ8TB37 319 aa21.64■■□□□ 1.05
TRIM54-201ENST00000296098 THAP3Q8WTV1 239 aaPredicted RBP21.64■■□□□ 1.05
TRIM54-201ENST00000296098 ADAMTS14Q8WXS8 1223 aa21.64■■□□□ 1.05
TRIM54-201ENST00000296098 TXNIPQ9H3M7 391 aa21.64■■□□□ 1.05
TRIM54-201ENST00000296098 PCDHGA9Q9Y5G4 932 aaKnown RBP21.64■■□□□ 1.05
TRIM54-201ENST00000296098 IFITM5A6NNB3 132 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 HSPB2A8KAH6 182 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 IGHMP01871 453 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 FOSL2P15408 326 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 RPS27P42677 84 aaKnown RBP21.63■■□□□ 1.05
TRIM54-201ENST00000296098 MMP15P51511 669 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 AGFG1P52594 562 aaKnown RBP21.63■■□□□ 1.05
TRIM54-201ENST00000296098 HSPB2Q16082 182 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 KRT74Q7RTS7 529 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 ZNF433Q8N7K0 673 aaPredicted RBP21.63■■□□□ 1.05
TRIM54-201ENST00000296098 THEM6Q8WUY1 208 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 RANGRFQ9HD47 186 aaPredicted RBP21.63■■□□□ 1.05
TRIM54-201ENST00000296098 ITGB1BP2Q9UKP3 347 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 CAMK2AQ9UQM7 478 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 TNRC6BQ9UPQ9 1833 aaKnown RBP21.63■■□□□ 1.05
TRIM54-201ENST00000296098 PCNX3Q9H6A9 2034 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 ANKUB1A6NFN9 424 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 CENPXA8MT69 81 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 PLPP3O14495 311 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 TMEM127O75204 238 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 PMS2CLQ68D20 193 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 PAPD4Q6PIY7 484 aaKnown RBP21.63■■□□□ 1.05
TRIM54-201ENST00000296098 ESPNLQ6ZVH7 1005 aa21.63■■□□□ 1.05
TRIM54-201ENST00000296098 UTS2BQ765I0 119 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms