RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 RAMP3O60896 148 aa4□□□□□ -1.77
CD44-202ENST00000278385 PSIP1O75475 530 aaKnown RBP4□□□□□ -1.77
CD44-202ENST00000278385 FARS2O95363 451 aaKnown RBP4□□□□□ -1.77
CD44-202ENST00000278385 ACTL6AO96019 429 aa4□□□□□ -1.77
CD44-202ENST00000278385 IFNA14P01570 189 aa4□□□□□ -1.77
CD44-202ENST00000278385 P04436 131 aa4□□□□□ -1.77
CD44-202ENST00000278385 ALDOBP05062 364 aa4□□□□□ -1.77
CD44-202ENST00000278385 FABP1P07148 127 aa4□□□□□ -1.77
CD44-202ENST00000278385 CMA1P23946 247 aa4□□□□□ -1.77
CD44-202ENST00000278385 HLA-DMAP28067 261 aa4□□□□□ -1.77
CD44-202ENST00000278385 HTR2CP28335 458 aa4□□□□□ -1.77
CD44-202ENST00000278385 GABRR2P28476 465 aa4□□□□□ -1.77
CD44-202ENST00000278385 KDELR2P33947 212 aa4□□□□□ -1.77
CD44-202ENST00000278385 MAS1LP35410 378 aa4□□□□□ -1.77
CD44-202ENST00000278385 CSKP41240 450 aa4□□□□□ -1.77
CD44-202ENST00000278385 MAGEA5P43359 124 aa4□□□□□ -1.77
CD44-202ENST00000278385 TMEM50BP56557 158 aa4□□□□□ -1.77
CD44-202ENST00000278385 ATP6V0D1P61421 351 aa4□□□□□ -1.77
CD44-202ENST00000278385 TFAMQ00059 246 aaKnown RBP4□□□□□ -1.77
CD44-202ENST00000278385 HSF1Q00613 529 aa4□□□□□ -1.77
CD44-202ENST00000278385 MYL7Q01449 175 aa4□□□□□ -1.77
CD44-202ENST00000278385 CDC20Q12834 499 aa4□□□□□ -1.77
CD44-202ENST00000278385 KLRB1Q12918 225 aa4□□□□□ -1.77
CD44-202ENST00000278385 SELENBP1Q13228 472 aa4□□□□□ -1.77
CD44-202ENST00000278385 MED21Q13503 144 aa4□□□□□ -1.77
CD44-202ENST00000278385 CHI3L2Q15782 390 aa4□□□□□ -1.77
CD44-202ENST00000278385 ZNF77Q15935 545 aa4□□□□□ -1.77
CD44-202ENST00000278385 HLA-BQ31612 363 aa4□□□□□ -1.77
CD44-202ENST00000278385 PHLDA2Q53GA4 152 aa4□□□□□ -1.77
CD44-202ENST00000278385 TCHHL1Q5QJ38 904 aaPredicted RBP4□□□□□ -1.77
CD44-202ENST00000278385 C9orf135Q5VTT2 229 aa4□□□□□ -1.77
CD44-202ENST00000278385 BSPRYQ5W0U4 402 aa4□□□□□ -1.77
CD44-202ENST00000278385 RESP18Q5W5W9 173 aa4□□□□□ -1.77
CD44-202ENST00000278385 OR5M10Q6IEU7 315 aa4□□□□□ -1.77
CD44-202ENST00000278385 ADNP2Q6IQ32 1131 aa4□□□□□ -1.77
CD44-202ENST00000278385 ZNF425Q6IV72 752 aa4□□□□□ -1.77
CD44-202ENST00000278385 SLC27A4Q6P1M0 643 aa4□□□□□ -1.77
CD44-202ENST00000278385 TMEM64Q6YI46 380 aa4□□□□□ -1.77
CD44-202ENST00000278385 ITIH5Q86UX2 942 aa4□□□□□ -1.77
CD44-202ENST00000278385 HPS6Q86YV9 775 aa4□□□□□ -1.77
CD44-202ENST00000278385 FUNDC1Q8IVP5 155 aa4□□□□□ -1.77
CD44-202ENST00000278385 ZC3H3Q8IXZ2 948 aaKnown RBP4□□□□□ -1.77
CD44-202ENST00000278385 TMEM86AQ8N2M4 240 aa4□□□□□ -1.77
CD44-202ENST00000278385 TBC1D19Q8N5T2 526 aa4□□□□□ -1.77
CD44-202ENST00000278385 TMEM105Q8N8V8 129 aa4□□□□□ -1.77
CD44-202ENST00000278385 TEX45Q8NA69 505 aa4□□□□□ -1.77
CD44-202ENST00000278385 PRSS33Q8NF86 280 aa4□□□□□ -1.77
CD44-202ENST00000278385 OR2AP1Q8NGE2 309 aa4□□□□□ -1.77
CD44-202ENST00000278385 OR4C15Q8NGM1 316 aa4□□□□□ -1.77
CD44-202ENST00000278385 THAP6Q8TBB0 222 aa4□□□□□ -1.77
CD44-202ENST00000278385 SPPL2BQ8TCT7 592 aa4□□□□□ -1.77
CD44-202ENST00000278385 MRAPQ8TCY5 172 aa4□□□□□ -1.77
CD44-202ENST00000278385 MAGEE2Q8TD90 523 aaPredicted RBP4□□□□□ -1.77
CD44-202ENST00000278385 TM9SF4Q92544 642 aa4□□□□□ -1.77
CD44-202ENST00000278385 FGF14Q92915 247 aa4□□□□□ -1.77
CD44-202ENST00000278385 PSMG2Q969U7 264 aa4□□□□□ -1.77
CD44-202ENST00000278385 BIRC7Q96CA5 298 aa4□□□□□ -1.77
CD44-202ENST00000278385 BPIFA2Q96DR5 249 aa4□□□□□ -1.77
CD44-202ENST00000278385 TIMD4Q96H15 378 aa4□□□□□ -1.77
CD44-202ENST00000278385 ZNF419Q96HQ0 510 aaPredicted RBP4□□□□□ -1.77
CD44-202ENST00000278385 ANKRD36BP1Q96IX9 119 aa4□□□□□ -1.77
CD44-202ENST00000278385 C10orf90Q96M02 699 aa4□□□□□ -1.77
CD44-202ENST00000278385 TNFRSF13CQ96RJ3 184 aa4□□□□□ -1.77
CD44-202ENST00000278385 RPP25Q9BUL9 199 aaKnown RBP4□□□□□ -1.77
CD44-202ENST00000278385 CCDC28BQ9BUN5 200 aa4□□□□□ -1.77
CD44-202ENST00000278385 SPRY4Q9C004 299 aa4□□□□□ -1.77
CD44-202ENST00000278385 GPN2Q9H9Y4 310 aaPredicted RBP4□□□□□ -1.77
CD44-202ENST00000278385 PNRC2Q9NPJ4 139 aaKnown RBP4□□□□□ -1.77
CD44-202ENST00000278385 NANSQ9NR45 359 aa4□□□□□ -1.77
CD44-202ENST00000278385 SLC17A5Q9NRA2 495 aa4□□□□□ -1.77
CD44-202ENST00000278385 ABCB10Q9NRK6 738 aa4□□□□□ -1.77
CD44-202ENST00000278385 GPR83Q9NYM4 423 aa4□□□□□ -1.77
CD44-202ENST00000278385 IL36GQ9NZH8 169 aa4□□□□□ -1.77
CD44-202ENST00000278385 MAN1B1Q9UKM7 699 aa4□□□□□ -1.77
CD44-202ENST00000278385 NUP50Q9UKX7 468 aa4□□□□□ -1.77
CD44-202ENST00000278385 HYOU1Q9Y4L1 999 aa4□□□□□ -1.77
CD44-202ENST00000278385 TBL2Q9Y4P3 447 aaKnown RBP4□□□□□ -1.77
CD44-202ENST00000278385 INSL5Q9Y5Q6 135 aa4□□□□□ -1.77
CD44-202ENST00000278385 FKBP7Q9Y680 259 aa4□□□□□ -1.77
CD44-202ENST00000278385 COLEC10Q9Y6Z7 277 aa4□□□□□ -1.77
CD44-202ENST00000278385 NLRC5Q86WI3 1866 aa4□□□□□ -1.77
CD44-202ENST00000278385 MYO7AQ13402 2215 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 PLXNA4Q9HCM2 1894 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 LAMA2P24043 3122 aaKnown RBP3.99□□□□□ -1.77
CD44-202ENST00000278385 TRBV9A0A0B4J1U6 114 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 CCDC182A6NF36 153 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 ARGFXA6NJG6 315 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 PROB1E7EW31 1015 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 PI15O43692 258 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 GATCO43716 136 aaKnown RBP3.99□□□□□ -1.77
CD44-202ENST00000278385 SYNGR3O43761 229 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 ADAP1O75689 374 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 SC5DO75845 299 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 WISP2O76076 250 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 VAMP5O95183 116 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 TNNC2P02585 160 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 H2BFMP0C1H6 154 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 OR4Q2P0C623 313 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 OR4E1P0C645 316 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 NHLRC4P0CG21 123 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms