RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 TRAPPC6BQ86SZ2 158 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 OR10Z1Q8NGY1 313 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 FNDC9Q8TBE3 224 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 TBC1D20Q96BZ9 403 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 C2orf42Q9NWW7 574 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.64□□□□□ -0.71
VPS33A-201ENST00000267199 UBE2J1Q9Y385 318 aaPredicted RBP10.64□□□□□ -0.71
VPS33A-201ENST00000267199 V9GYH0 126 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 MIA3Q5JRA6 1907 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 TRBV5-3A0A0A0MS03 114 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 MAP2K6P52564 334 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 FLI1Q01543 452 aaPredicted RBP10.64□□□□□ -0.71
VPS33A-201ENST00000267199 TRMT12Q53H54 448 aaKnown RBP10.64□□□□□ -0.71
VPS33A-201ENST00000267199 KIAA0907Q7Z7F0 614 aaPredicted RBP10.64□□□□□ -0.71
VPS33A-201ENST00000267199 OR8D4Q8NGM9 314 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 TMED6Q8WW62 240 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 Q96M85 177 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 GPATCH2Q9NW75 528 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 NCDNQ9UBB6 729 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 ARID2Q68CP9 1835 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 ZNF705GA8MUZ8 300 aaPredicted RBP10.63□□□□□ -0.71
VPS33A-201ENST00000267199 LEUTXA8MZ59 168 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 P2RX6O15547 441 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 B3GALNT1O75752 331 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 TMEM225BP0DP42 221 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 PNMTP11086 282 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 MVDP53602 400 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 EMP2P54851 167 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 CAMK2BQ13554 666 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 SERTAD2Q14140 314 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 RAB30Q15771 203 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 OTPQ5XKR4 325 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 MEX3BQ6ZN04 569 aaKnown RBP10.63□□□□□ -0.71
VPS33A-201ENST00000267199 BEND4Q6ZU67 534 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 OR51T1Q8NGJ9 327 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 SCGB1C1Q8TD33 95 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 ADAM18Q9Y3Q7 739 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 H3BML4 177 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 PEX12O00623 359 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 FBLP22087 321 aaKnown RBP10.63□□□□□ -0.71
VPS33A-201ENST00000267199 PPA1Q15181 289 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 ST3GAL2Q16842 350 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 C3orf33Q6P1S2 294 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 NIPAL3Q6P499 406 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 FBXO46Q6PJ61 603 aaPredicted RBP10.63□□□□□ -0.71
VPS33A-201ENST00000267199 ELF4Q99607 663 aaPredicted RBP10.63□□□□□ -0.71
VPS33A-201ENST00000267199 TCEAL7Q9BRU2 100 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 MED18Q9BUE0 208 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 SELENOIQ9C0D9 397 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 POFUT1Q9H488 388 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 ANKRD19PQ9H560 264 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 PLEKHB1Q9UF11 243 aaPredicted RBP10.63□□□□□ -0.71
VPS33A-201ENST00000267199 TMEM269A0A1B0GVZ9 245 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 CDC14CA4D256 554 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 PLA2G10O15496 165 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 ATG12O94817 140 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 SLC34A2O95436 690 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 SERPINA5P05154 406 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 UBL4AP11441 157 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 TAS2R20P59543 309 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 ZNF79Q15937 498 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 RNF165Q6ZSG1 346 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 CAMKMTQ7Z624 323 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 ABI3BPQ7Z7G0 1075 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 TMEM156Q8N614 296 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 OR5M1Q8NGP8 315 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 OR13C9Q8NGT0 318 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 RNF141Q8WVD5 230 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 SLC35A4Q96G79 324 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 VN1R3Q9BXE9 311 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 VSX1Q9NZR4 365 aaPredicted RBP10.63□□□□□ -0.71
VPS33A-201ENST00000267199 REV1Q9UBZ9 1251 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 CGGBP1Q9UFW8 167 aaPredicted RBP10.63□□□□□ -0.71
VPS33A-201ENST00000267199 POMT2Q9UKY4 750 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 RPH3AQ9Y2J0 694 aaPredicted RBP10.63□□□□□ -0.71
VPS33A-201ENST00000267199 ZNF337Q9Y3M9 751 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 PIKFYVEQ9Y2I7 2098 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 MAN2B1O00754 1011 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 RAD51DO75771 328 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 OPN1LWP04000 364 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 LIMS3P0CW19 117 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 LIMS4P0CW20 117 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 SPTBP11277 2137 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 POU3F3P20264 500 aaPredicted RBP10.63□□□□□ -0.71
VPS33A-201ENST00000267199 GLYATL3Q5SZD4 288 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 TMEM184AQ6ZMB5 413 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 ZNF836Q6ZNA1 936 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 SIRT6Q8N6T7 355 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 ANKRD53Q8N9V6 530 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 NANPQ8TBE9 248 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 CNRIP1Q96F85 164 aaPredicted RBP10.63□□□□□ -0.71
VPS33A-201ENST00000267199 WDR89Q96FK6 387 aaPredicted RBP10.63□□□□□ -0.71
VPS33A-201ENST00000267199 MARVELD1Q9BSK0 173 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 TSPAN10Q9H1Z9 355 aaPredicted RBP10.63□□□□□ -0.71
VPS33A-201ENST00000267199 CYSLTR2Q9NS75 346 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 PPIL1Q9Y3C6 166 aa10.63□□□□□ -0.71
VPS33A-201ENST00000267199 BRWD3Q6RI45 1802 aa10.62□□□□□ -0.71
VPS33A-201ENST00000267199 KIR2DS5A0A0G2JLQ3 304 aa10.62□□□□□ -0.71
VPS33A-201ENST00000267199 A0A0G2JNG1 304 aa10.62□□□□□ -0.71
VPS33A-201ENST00000267199 KIR2DS3K7RE56 304 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms