RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 NMBP08949 121 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 ZNF44P15621 663 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 FXYD4P59646 89 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 SP3Q02447 781 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 FABP9Q0Z7S8 132 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 LIMS2Q7Z4I7 341 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 RASGRP3Q8IV61 690 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 LAS2Q8IYD9 372 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 TMEFF1Q8IYR6 380 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 GABRG1Q8N1C3 465 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 Q96M85 177 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 SLC5A7Q9GZV3 580 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 FAM212BQ9NTI7 297 aaPredicted RBP13.89□□□□□ -0.19
CASC3-201ENST00000264645 LRFN1Q9P244 771 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 CGGBP1Q9UFW8 167 aaPredicted RBP13.89□□□□□ -0.19
CASC3-201ENST00000264645 SMCO3A2RU48 225 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 TMEM200CA6NKL6 621 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 TMEM189-UBE2V1I3L0A0 370 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 IMPA2O14732 288 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 SLC16A7O60669 478 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 NDUFB6O95139 128 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 OR13C7P0DN81 318 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 ACY1Q03154 408 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 ELAVL3Q14576 367 aaKnown RBP13.89□□□□□ -0.19
CASC3-201ENST00000264645 SGPP2Q8IWX5 399 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 CCDC86Q9H6F5 360 aaKnown RBP13.89□□□□□ -0.19
CASC3-201ENST00000264645 TESQ9UGI8 421 aaKnown RBP13.89□□□□□ -0.19
CASC3-201ENST00000264645 FBXO4Q9UKT5 387 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 PPM1DO15297 605 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 CRTAPO75718 401 aaPredicted RBP13.89□□□□□ -0.19
CASC3-201ENST00000264645 GNRHRP30968 328 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 EMP2P54851 167 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 SNRPNP63162 240 aaKnown RBP13.89□□□□□ -0.19
CASC3-201ENST00000264645 ARHGAP19Q14CB8 494 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 LPCAT3Q6P1A2 487 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 SEZ6L2Q6UXD5 910 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 HSD17B11Q8NBQ5 300 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 SFT2D1Q8WV19 159 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 SLC41A2Q96JW4 573 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 OR5B12Q96R08 314 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 SPACA1Q9HBV2 294 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 HRASLS2Q9NWW9 162 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 PPP4R1LQ9P1A2 415 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 RHBDD3Q9Y3P4 386 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 FOCADQ5VW36 1801 aa13.89□□□□□ -0.19
CASC3-201ENST00000264645 A0A087WZY1 265 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 SLC5A10A0PJK1 596 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 FAM74A7A6NL05 159 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 ZNF705FA8MVS1 300 aaPredicted RBP13.88□□□□□ -0.19
CASC3-201ENST00000264645 AQP8O94778 261 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 ZNF705DP0CH99 300 aaPredicted RBP13.88□□□□□ -0.19
CASC3-201ENST00000264645 ZNF705BP0CI00 300 aaPredicted RBP13.88□□□□□ -0.19
CASC3-201ENST00000264645 SDHAP31040 664 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 AGERQ15109 404 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 FAM74A3Q4VXF1 159 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 ZNF561Q8N587 486 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 OR5M9Q8NGP3 310 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 GOT1L1Q8NHS2 421 aaPredicted RBP13.88□□□□□ -0.19
CASC3-201ENST00000264645 FAM213BQ8TBF2 198 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 ZNF75AQ96N20 296 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 COPS7AQ9UBW8 275 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 RFPL4AA6NLU0 287 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 RFPL4AL1F8VTS6 287 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 ONECUT3O60422 494 aaPredicted RBP13.88□□□□□ -0.19
CASC3-201ENST00000264645 MPC2O95563 127 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 IGLV3-27P01718 113 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 APODP05090 189 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 IL5P05113 134 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 CALCBP10092 127 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 PCBP3P57721 371 aaKnown RBP13.88□□□□□ -0.19
CASC3-201ENST00000264645 RPS15AP62244 130 aaKnown RBP13.88□□□□□ -0.19
CASC3-201ENST00000264645 LAMTOR1Q6IAA8 161 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 KLHDC8BQ8IXV7 354 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 OR4K15Q8NH41 348 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 IL20Q9NYY1 176 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 TMEM235A6NFC5 223 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 RDH16O75452 317 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 FGF19O95750 216 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 HIST1H1CP16403 213 aaKnown RBP13.88□□□□□ -0.19
CASC3-201ENST00000264645 PSMB6P28072 239 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 SLC22A6Q4U2R8 563 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 ZNF836Q6ZNA1 936 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 CAMKMTQ7Z624 323 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 HAVCR2Q8TDQ0 301 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 ZG16BQ96DA0 208 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 SLC19A3Q9BZV2 496 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 CPNE7Q9UBL6 633 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 ADAM29Q9UKF5 820 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 KPTNQ9Y664 436 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 TMEM212A6NML5 194 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 TLX3O43711 291 aaPredicted RBP13.88□□□□□ -0.19
CASC3-201ENST00000264645 HOXA1P49639 335 aaPredicted RBP13.88□□□□□ -0.19
CASC3-201ENST00000264645 MAMSTRQ6ZN01 415 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 OR2M4Q96R27 311 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 FAM96BQ9Y3D0 163 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 ZNF337Q9Y3M9 751 aa13.88□□□□□ -0.19
CASC3-201ENST00000264645 PHLPP1O60346 1717 aa13.87□□□□□ -0.19
CASC3-201ENST00000264645 ZNF726A6NNF4 738 aa13.87□□□□□ -0.19
CASC3-201ENST00000264645 DCTN6O00399 190 aa13.87□□□□□ -0.19
CASC3-201ENST00000264645 PEX12O00623 359 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms