RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 SIGLEC14Q08ET2 396 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF528Q3MIS6 628 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 MANEAQ5SRI9 462 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 C10orf91Q5T1B1 145 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 RAB12Q6IQ22 244 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF550Q7Z398 422 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 KREMEN2Q8NCW0 462 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 GLYATL2Q8WU03 294 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 CNTNAP3BQ96NU0 1288 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 MNTQ99583 582 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 CHST6Q9GZX3 395 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 LMAN2LQ9H0V9 348 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF768Q9H5H4 540 aaKnown RBP11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 ESRP2Q9H6T0 727 aaKnown RBP11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 ERVK-19Q9WJR5 959 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 NPIPA5A0A0B4J1W7 369 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 TMEM212A6NML5 194 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 OR2AT4A6NND4 320 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 HSPB2A8KAH6 182 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 MCIDASD6RGH6 385 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 NPIPA7E9PJI5 369 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 F5H0A9 414 aaPredicted RBP11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 CCL16O15467 120 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 P2RX6O15547 441 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 B3GALT2O43825 422 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 RPP14O95059 124 aaKnown RBP11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 WNT11O96014 354 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 MAS1P04201 325 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF888P0CJ79 500 aaPredicted RBP11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 NPIPA8P0DM63 369 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 BDKRB2P30411 391 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 CCR2P41597 374 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 MAGEB1P43366 347 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 SLC25A1P53007 311 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 PRPS1P60891 318 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 BLOC1S1P78537 153 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF234Q14588 700 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 TEAD2Q15562 447 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 HSPB2Q16082 182 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 TRMT12Q53H54 448 aaKnown RBP11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 FHL5Q5TD97 284 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 LIPNQ5VXI9 398 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 NKAIN2Q5VXU1 208 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF425Q6IV72 752 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 TMEM88Q6PEY1 159 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 GTPBP8Q8N3Z3 284 aaPredicted RBP11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF676Q8N7Q3 588 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 OR52E1Q8NGJ3 308 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 NT5CQ8TCD5 201 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 GPX8Q8TED1 209 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 TIMM29Q9BSF4 260 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 ALG12Q9BV10 488 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 ASF1BQ9NVP2 202 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF337Q9Y3M9 751 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 LOC100289279A0A1B0GTE1 492 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 C1QTNF3-AMACRE9PGA6 284 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 HEXAP06865 529 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 SLC35G6P0C7Q6 338 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 HLA-GP17693 338 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 CSRP1P21291 193 aaKnown RBP11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 RASGEF1BQ0VAM2 473 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 RAB11BQ15907 218 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 LILRA6Q6PI73 481 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 FIGNL1Q6PIW4 674 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 LINC00114Q6XXX2 140 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF813Q6ZN06 617 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 OR1S2Q8NGQ3 325 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 OR8S1Q8NH09 359 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 IL21RQ9HBE5 538 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 SLC27A6Q9Y2P4 619 aa11.29□□□□□ -0.6
CHMP2B-201ENST00000263780 A0A1B0GVT2 93 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 OR6C68A6NDL8 312 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 FAM25EA8MYX2 175 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 FGF16O43320 207 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 UPK3AO75631 287 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 SLC25A12O75746 678 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 S100A9P06702 114 aaKnown RBP11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 NGFRP08138 427 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 GUSBP08236 651 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 GABRA3P34903 492 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 PPM1AP35813 382 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 DHCR24Q15392 516 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 TMED4Q7Z7H5 227 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 JAZF1Q86VZ6 243 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 STK35Q8TDR2 534 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 SFT2D1Q8WV19 159 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 ZBTB8AQ96BR9 441 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 HDAC8Q9BY41 377 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 FBXO34Q9NWN3 711 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 FRRS1LQ9P0K9 344 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 MKL2Q9ULH7 1088 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 NOP16Q9Y3C1 178 aaKnown RBP11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 SPACA6W5XKT8 324 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 TTLL8A6PVC2 850 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 PSMD9O00233 223 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 EIF1AYO14602 144 aaKnown RBP11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 S100A8P05109 93 aa11.28□□□□□ -0.6
CHMP2B-201ENST00000263780 ADH1AP07327 375 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms