RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 HRH3Q9Y5N1 445 aa11.15□□□□□ -0.62
SMG6-201ENST00000263073 XRCC3O43542 346 aa11.15□□□□□ -0.63
SMG6-201ENST00000263073 EIF4EP06730 217 aaKnown RBP11.15□□□□□ -0.63
SMG6-201ENST00000263073 TAS2R46P59540 309 aa11.15□□□□□ -0.63
SMG6-201ENST00000263073 SERTAD2Q14140 314 aa11.15□□□□□ -0.63
SMG6-201ENST00000263073 KIAA0895LQ68EN5 471 aa11.15□□□□□ -0.63
SMG6-201ENST00000263073 RDH10Q8IZV5 341 aa11.15□□□□□ -0.63
SMG6-201ENST00000263073 OR52B4Q8NGK2 314 aa11.15□□□□□ -0.63
SMG6-201ENST00000263073 PSMF1Q92530 271 aa11.15□□□□□ -0.63
SMG6-201ENST00000263073 SHDQ96IW2 340 aa11.15□□□□□ -0.63
SMG6-201ENST00000263073 UQCC2Q9BRT2 126 aa11.15□□□□□ -0.63
SMG6-201ENST00000263073 LMF2Q9BU23 707 aaKnown RBP11.15□□□□□ -0.63
SMG6-201ENST00000263073 STRADBQ9C0K7 418 aa11.15□□□□□ -0.63
SMG6-201ENST00000263073 PTRH2Q9Y3E5 179 aaKnown RBP11.15□□□□□ -0.63
SMG6-201ENST00000263073 IGHV3-64DA0A0J9YX35 117 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 ACHEP22303 614 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 HOXD9P28356 352 aaPredicted RBP11.14□□□□□ -0.63
SMG6-201ENST00000263073 RIPPLY1Q0D2K3 151 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 ALKBH1Q13686 389 aaKnown RBP11.14□□□□□ -0.63
SMG6-201ENST00000263073 TMEM176BQ3YBM2 270 aaPredicted RBP11.14□□□□□ -0.63
SMG6-201ENST00000263073 AARDQ4LEZ3 155 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 MRPL10Q7Z7H8 261 aaKnown RBP11.14□□□□□ -0.63
SMG6-201ENST00000263073 NANPQ8TBE9 248 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 CASD1Q96PB1 797 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 METTL9Q9H1A3 318 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 FBXO7Q9Y3I1 522 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 CSAG2Q9Y5P2 127 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 TMEM212A6NML5 194 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 DCTN6O00399 190 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 IGHG1P01857 330 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 ATP1B1P05026 303 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 POU3F2P20265 443 aaPredicted RBP11.14□□□□□ -0.63
SMG6-201ENST00000263073 HAGHQ16775 308 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 HIST2H3AQ71DI3 136 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 SLC51BQ86UW2 128 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 ARHGAP9Q9BRR9 750 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 PLK3Q9H4B4 646 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 TRAPPC2LQ9UL33 140 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 LRRC37A3O60309 1634 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 A0A1B0GWA3 101 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 AGAP14A8MT82 685 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 SULT1C4O75897 302 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 OR2T7P0C7T2 308 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 JUNBP17275 347 aaPredicted RBP11.14□□□□□ -0.63
SMG6-201ENST00000263073 KITLGP21583 273 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 PFN3P60673 137 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 AQP6Q13520 282 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 HABP2Q14520 560 aaPredicted RBP11.14□□□□□ -0.63
SMG6-201ENST00000263073 CPXM2Q8N436 756 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 CNEP1R1Q8N9A8 125 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 OR2T27Q8NH04 317 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 OR5K2Q8NHB8 316 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 LURAP1Q96LR2 239 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 UBQLN4Q9NRR5 601 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 RGPD5Q99666 1765 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 ZBTB42B2RXF5 422 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 LALBAP00709 142 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 TK1P04183 234 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 PI3P19957 117 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 TEAD1P28347 426 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 BIDP55957 195 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 TMEM41BQ5BJD5 291 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 GAREM2Q75VX8 874 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 SFT2D1Q8WV19 159 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 ULBP2Q9BZM5 246 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 SLC39A9Q9NUM3 307 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 CAMK2AQ9UQM7 478 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 DOT1LQ8TEK3 1739 aa11.14□□□□□ -0.63
SMG6-201ENST00000263073 CYTIPO60759 359 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 GPR75O95800 540 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 CR2P20023 1033 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 RPS27P42677 84 aaKnown RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 HOXA1P49639 335 aaPredicted RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 DEFB103AP81534 67 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 BAK1Q16611 211 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 SYT14P1Q58G82 188 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 PLAC9Q5JTB6 97 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 ACSM5Q6NUN0 579 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 SLCO4C1Q6ZQN7 724 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 VASH1Q7L8A9 365 aaPredicted RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 DAZAP1Q96EP5 407 aaKnown RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 AMDHD1Q96NU7 426 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 FBXO8Q9NRD0 319 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 AQP7O14520 342 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 EPHA2P29317 976 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 IL2RGP31785 369 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 PTGER4P35408 488 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 EPHA4P54764 986 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 OR8G2PQ6IF36 304 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 SLC22A12Q96S37 553 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 HOXC11O43248 304 aaPredicted RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 ZNF264O43296 627 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 C1QBP02746 253 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 ZNF728P0DKX0 622 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 ATP1B3P54709 279 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 RAB11AP62491 216 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 ARL6IP1Q15041 203 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 CDKN3Q16667 212 aa11.13□□□□□ -0.63
SMG6-201ENST00000263073 KIAA0907Q7Z7F0 614 aaPredicted RBP11.13□□□□□ -0.63
SMG6-201ENST00000263073 ZNF610Q8N9Z0 462 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms