RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 BABAM2Q9NXR7 383 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 PRRG2O14669 202 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 SURF4O15260 269 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 CSO75390 466 aaKnown RBP11.2□□□□□ -0.62
SPG11-201ENST00000261866 DNAJB5O75953 348 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 SSTR2P30874 369 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 EMX1Q04741 257 aaPredicted RBP11.2□□□□□ -0.62
SPG11-201ENST00000261866 CRMP1Q14194 572 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 EXT1Q16394 746 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 DPY19L2P1Q6NXN4 242 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 RBMXL3Q8N7X1 1067 aaKnown RBP11.2□□□□□ -0.62
SPG11-201ENST00000261866 NIPSNAP1Q9BPW8 284 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 MYO18AQ92614 2054 aaKnown RBP11.2□□□□□ -0.62
SPG11-201ENST00000261866 A0A1W2PPV4 95 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 SNAPC5O75971 98 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 ACP2P11117 423 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 GPLD1P80108 840 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 RAB31Q13636 194 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 MBOAT2Q6ZWT7 520 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 GTPBP8Q8N3Z3 284 aaPredicted RBP11.2□□□□□ -0.62
SPG11-201ENST00000261866 BCORP1Q8N888 145 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 OR6T1Q8NGN1 323 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 OR10K1Q8NGX5 313 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 ZDHHC5Q9C0B5 715 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 NPFFR2Q9Y5X5 522 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 MCRIP1C9JLW8 97 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 LGALS8O00214 317 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 SC5DO75845 299 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 BCL7AQ4VC05 210 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 ZNF691Q5VV52 312 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 APOOLQ6UXV4 268 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 OR6F1Q8NGZ6 308 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 ELP4Q96EB1 424 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 AMBRA1Q9C0C7 1298 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 HRH4Q9H3N8 390 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 SIDT1Q9NXL6 827 aaKnown RBP11.2□□□□□ -0.62
SPG11-201ENST00000261866 MRPS28Q9Y2Q9 187 aaKnown RBP11.2□□□□□ -0.62
SPG11-201ENST00000261866 ZNF281Q9Y2X9 895 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 ITGB4P16144 1822 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 CRYM-AS1A6NIL9 109 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 FGF17O60258 216 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 KIAA1024LP59773 190 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 SPARTQ8N0X7 666 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 BPIFCQ8NFQ6 507 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 TAS2R8Q9NYW2 309 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 TBX21Q9UL17 535 aa11.2□□□□□ -0.62
SPG11-201ENST00000261866 TXNDC12O95881 172 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 IL9P15248 144 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 HTR2AP28223 471 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 SLC19A1P41440 591 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 ARL16Q0P5N6 197 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 PLAC9Q5JTB6 97 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 C1orf140Q5VVS0 124 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 IL34Q6ZMJ4 242 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 Q6ZSR9 355 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 ANKRD13BQ86YJ7 626 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 TRUB1Q8WWH5 349 aaKnown RBP11.19□□□□□ -0.62
SPG11-201ENST00000261866 EMG1Q92979 244 aaKnown RBP11.19□□□□□ -0.62
SPG11-201ENST00000261866 ZNF587Q96SQ5 575 aaPredicted RBP11.19□□□□□ -0.62
SPG11-201ENST00000261866 ZNF816-ZNF321PA0A0X1KG74 233 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 B4GALT3O60512 393 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 SLC34A2O95436 690 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 BLVRBP30043 206 aaPredicted RBP11.19□□□□□ -0.62
SPG11-201ENST00000261866 FOXK2Q01167 660 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 RETREG3Q86VR2 466 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 ZNF321PQ8N8H1 164 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 FAM71CQ8NEG0 241 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 ZFP90Q8TF47 636 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 FAM173AQ9BQD7 235 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 MED18Q9BUE0 208 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 SEMA4CQ9C0C4 833 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 ZNF696Q9H7X3 374 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 NOX4Q9NPH5 578 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 FRMPD2BQ6IN97 320 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 OR4N2Q8NGD1 307 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 GPR119Q8TDV5 335 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 ROBO4Q8WZ75 1007 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 MS4A6EQ96DS6 147 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 EPHX3Q9H6B9 360 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 LTB4R2Q9NPC1 389 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 ZNF71Q9NQZ8 489 aaPredicted RBP11.19□□□□□ -0.62
SPG11-201ENST00000261866 CLDN24A6NM45 220 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 TAS2R20P59543 309 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 POU4F3Q15319 338 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 MEP1BQ16820 701 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 SLC35F3Q8IY50 421 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 OR7G1Q8NGA0 311 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 MSI2Q96DH6 328 aaKnown RBP11.19□□□□□ -0.62
SPG11-201ENST00000261866 BANF2Q9H503 90 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 OBP2AQ9NY56 170 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 STEAP1Q9UHE8 339 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 ADAM29Q9UKF5 820 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 ARNTLO00327 626 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 WNT11O96014 354 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 NKX6-1P78426 367 aaPredicted RBP11.19□□□□□ -0.62
SPG11-201ENST00000261866 SOWAHCQ53LP3 525 aaPredicted RBP11.19□□□□□ -0.62
SPG11-201ENST00000261866 MFSD12Q6NUT3 480 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 FAM43BQ6ZT52 329 aaPredicted RBP11.19□□□□□ -0.62
SPG11-201ENST00000261866 SYT9Q86SS6 491 aa11.19□□□□□ -0.62
SPG11-201ENST00000261866 DNAJC5GQ8N7S2 189 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms