RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 PUDPQ08623 228 aa18.4■□□□□ 0.54
RTCA-201ENST00000260563 ZP4Q12836 540 aa18.4■□□□□ 0.54
RTCA-201ENST00000260563 PDK3Q15120 406 aa18.4■□□□□ 0.54
RTCA-201ENST00000260563 MS4A18Q3C1V0 323 aa18.4■□□□□ 0.54
RTCA-201ENST00000260563 KRT80Q6KB66 452 aa18.4■□□□□ 0.54
RTCA-201ENST00000260563 SLC38A2Q96QD8 506 aa18.4■□□□□ 0.54
RTCA-201ENST00000260563 KATNB1Q9BVA0 655 aa18.4■□□□□ 0.54
RTCA-201ENST00000260563 SF3B5Q9BWJ5 86 aaKnown RBP18.4■□□□□ 0.54
RTCA-201ENST00000260563 GP6Q9HCN6 339 aa18.4■□□□□ 0.54
RTCA-201ENST00000260563 NRIP3Q9NQ35 241 aa18.4■□□□□ 0.54
RTCA-201ENST00000260563 UBAP1Q9NZ09 502 aa18.4■□□□□ 0.54
RTCA-201ENST00000260563 COQ3Q9NZJ6 369 aa18.4■□□□□ 0.54
RTCA-201ENST00000260563 EMC3Q9P0I2 261 aa18.4■□□□□ 0.54
RTCA-201ENST00000260563 RNF6Q9Y252 685 aa18.4■□□□□ 0.54
RTCA-201ENST00000260563 A0A1W2PNV4 684 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 ZNF716A6NP11 495 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 HMGN1P05114 100 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 CRHP06850 196 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 CD14P08571 375 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 SLC16A1P53985 500 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 CTXN1P60606 82 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 TMEM201Q5SNT2 666 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 ENTHD1Q8IYW4 607 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 CNEP1R1Q8N9A8 125 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 ERMAPQ96PL5 475 aaPredicted RBP18.39■□□□□ 0.54
RTCA-201ENST00000260563 SFXN3Q9BWM7 321 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 BCO1Q9HAY6 547 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 FANCFQ9NPI8 374 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 INIPQ9NRY2 104 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 EMC9Q9Y3B6 208 aa18.39■□□□□ 0.54
RTCA-201ENST00000260563 MYO18BQ8IUG5 2567 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 M0R129 80 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 SURF4O15260 269 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 CTSSP25774 331 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 NOS3P29474 1203 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 AGTR1P30556 359 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 PCYT1AP49585 367 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 ERVK-25P63136 954 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 SIRPAP78324 504 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 FOXF2Q12947 444 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 SLC17A1Q14916 467 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 POU4F3Q15319 338 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 GUSBP1Q15486 140 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 SNAPC1Q16533 368 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 FAM214BQ7L5A3 538 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 TUSC5Q8IXB3 177 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 KDM8Q8N371 416 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 TRUB1Q8WWH5 349 aaKnown RBP18.39■□□□□ 0.53
RTCA-201ENST00000260563 UBE2FQ969M7 185 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 POLDIP3Q9BY77 421 aaKnown RBP18.39■□□□□ 0.53
RTCA-201ENST00000260563 RASSF1Q9NS23 344 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 ZNF226Q9NYT6 803 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 ADAM18Q9Y3Q7 739 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 PCDHGB5Q9Y5G0 923 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 IER3IP1Q9Y5U9 82 aa18.39■□□□□ 0.53
RTCA-201ENST00000260563 IGKV3D-15A0A087WSY6 115 aa18.38■□□□□ 0.53
RTCA-201ENST00000260563 ZNF724A8MTY0 619 aa18.38■□□□□ 0.53
RTCA-201ENST00000260563 ARPC3O15145 178 aa18.38■□□□□ 0.53
RTCA-201ENST00000260563 MPZL2O60487 215 aa18.38■□□□□ 0.53
RTCA-201ENST00000260563 AGFG2O95081 481 aa18.38■□□□□ 0.53
RTCA-201ENST00000260563 YES1P07947 543 aa18.38■□□□□ 0.53
RTCA-201ENST00000260563 APEHP13798 732 aaKnown RBP18.38■□□□□ 0.53
RTCA-201ENST00000260563 OPRM1P35372 400 aa18.38■□□□□ 0.53
RTCA-201ENST00000260563 CD47Q08722 323 aa18.38■□□□□ 0.53
RTCA-201ENST00000260563 MAD2L1BPQ15013 274 aaPredicted RBP18.38■□□□□ 0.53
RTCA-201ENST00000260563 SLC35F1Q5T1Q4 408 aa18.38■□□□□ 0.53
RTCA-201ENST00000260563 PTCHD4Q6ZW05 846 aa18.38■□□□□ 0.53
RTCA-201ENST00000260563 OR9K2Q8NGE7 335 aa18.38■□□□□ 0.53
RTCA-201ENST00000260563 ASB5Q8WWX0 329 aa18.38■□□□□ 0.53
RTCA-201ENST00000260563 OXGR1Q96P68 337 aa18.38■□□□□ 0.53
RTCA-201ENST00000260563 ZNF629Q9UEG4 869 aaPredicted RBP18.38■□□□□ 0.53
RTCA-201ENST00000260563 ING1Q9UK53 422 aaPredicted RBP18.38■□□□□ 0.53
RTCA-201ENST00000260563 GPR171O14626 319 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 DVL2O14641 736 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 IMPA2O14732 288 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 IDH3BO43837 385 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 PRKYO43930 277 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 ZG16O60844 167 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 SERPINI2O75830 405 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 TNFSF13O75888 250 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 ZNF43P17038 809 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 CHRNB4P30926 498 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 FAM122BQ7Z309 247 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 PXKQ7Z7A4 578 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 UEVLDQ8IX04 471 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 TCEANCQ8N8B7 351 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 ANKK1Q8NFD2 765 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 OR8J1Q8NGP2 316 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 RHOXF1Q8NHV9 184 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 FBLIM1Q8WUP2 373 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 PLEKHA8Q96JA3 519 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 TSPAN32Q96QS1 320 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 B3GAT1Q9P2W7 334 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 GRHPRQ9UBQ7 328 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 FLVCR1Q9Y5Y0 555 aa18.37■□□□□ 0.53
RTCA-201ENST00000260563 A0A1W2PRG6 482 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 SLC2A10O95528 541 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 IL18BPO95998 194 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 IGHMP01871 453 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 HLA-DOBP13765 273 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms