RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 RAB12Q6IQ22 244 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 ARHGAP11AQ6P4F7 1023 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 SPRED2Q7Z698 418 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 SKA3Q8IX90 412 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 OR52E2Q8NGJ4 325 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 OR6K6Q8NGW6 343 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 ARRDC3Q96B67 414 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 MRGPRX3Q96LB0 322 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 CACYBPQ9HB71 228 aaKnown RBP12.78□□□□□ -0.36
LIMD2-201ENST00000259006 PCDHB10Q9UN67 800 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 PRUNE2Q8WUY3 3088 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 IGKV1-8A0A0C4DH67 115 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 FAM86C2PA6NEL3 165 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 SBK2P0C263 348 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 ZNF25P17030 456 aaPredicted RBP12.78□□□□□ -0.36
LIMD2-201ENST00000259006 CALCRP30988 508 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 SLC7A9P82251 487 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 SRSF3P84103 164 aaKnown RBP12.78□□□□□ -0.36
LIMD2-201ENST00000259006 C2orf68Q2NKX9 166 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 FNDC3BQ53EP0 1204 aaKnown RBP12.78□□□□□ -0.36
LIMD2-201ENST00000259006 CNKSR3Q6P9H4 555 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 PAPD4Q6PIY7 484 aaKnown RBP12.78□□□□□ -0.36
LIMD2-201ENST00000259006 CLEC2AQ6UVW9 174 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 OR2L2Q8NH16 312 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 OR4C6Q8NH72 309 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 BADQ92934 168 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 PTCHD1Q96NR3 888 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 TNFRSF13CQ96RJ3 184 aa12.78□□□□□ -0.36
LIMD2-201ENST00000259006 PCDH8O95206 1070 aa12.77□□□□□ -0.36
LIMD2-201ENST00000259006 SLC35G4P0C7Q5 338 aa12.77□□□□□ -0.36
LIMD2-201ENST00000259006 GAMTQ14353 236 aa12.77□□□□□ -0.36
LIMD2-201ENST00000259006 BEX5Q5H9J7 111 aa12.77□□□□□ -0.36
LIMD2-201ENST00000259006 C16orf54Q6UWD8 224 aa12.77□□□□□ -0.36
LIMD2-201ENST00000259006 ZNF836Q6ZNA1 936 aa12.77□□□□□ -0.36
LIMD2-201ENST00000259006 OR7G2Q8NG99 324 aa12.77□□□□□ -0.36
LIMD2-201ENST00000259006 VWCEQ96DN2 955 aa12.77□□□□□ -0.36
LIMD2-201ENST00000259006 NOX4Q9NPH5 578 aa12.77□□□□□ -0.36
LIMD2-201ENST00000259006 TMIGD3P0DMS9 266 aaPredicted RBP12.77□□□□□ -0.37
LIMD2-201ENST00000259006 MPIP34949 423 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 RIPPLY1Q0D2K3 151 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 KLF9Q13886 244 aaPredicted RBP12.77□□□□□ -0.37
LIMD2-201ENST00000259006 C7orf61Q8IZ16 206 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 OR8S1Q8NH09 359 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 PGLYRP3Q96LB9 341 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 C1QTNF2Q9BXJ5 285 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 METTL9Q9H1A3 318 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 SLC25A32Q9H2D1 315 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 PRDM13Q9H4Q3 707 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 BCL2L10Q9HD36 194 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 ZNF106Q9H2Y7 1883 aaKnown RBP12.77□□□□□ -0.37
LIMD2-201ENST00000259006 A0A0A6YYD5 115 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 LAMP2P13473 410 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 HIST1H1TP22492 207 aaPredicted RBP12.77□□□□□ -0.37
LIMD2-201ENST00000259006 BDKRB2P30411 391 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 EPHA4P54764 986 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 MRGPREQ86SM8 312 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 SLITRK4Q8IW52 837 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 FOXRED2Q8IWF2 684 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 KISS1RQ969F8 398 aaPredicted RBP12.77□□□□□ -0.37
LIMD2-201ENST00000259006 C2orf88Q9BSF0 95 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 MFFQ9GZY8 342 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 TSPAN10Q9H1Z9 355 aaPredicted RBP12.77□□□□□ -0.37
LIMD2-201ENST00000259006 CERS4Q9HA82 394 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 SIRT7Q9NRC8 400 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 ZNF443Q9Y2A4 671 aaPredicted RBP12.77□□□□□ -0.37
LIMD2-201ENST00000259006 ZNF780BQ9Y6R6 833 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 FRMPD3Q5JV73 1810 aa12.77□□□□□ -0.37
LIMD2-201ENST00000259006 DENND4CQ5VZ89 1909 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 EYSQ5T1H1 3165 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 A0A1W2PPV9 198 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 RIIAD1A6NNX1 92 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 SPINT1O43278 529 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 EMC8O43402 210 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 GALR3O60755 368 aaPredicted RBP12.76□□□□□ -0.37
LIMD2-201ENST00000259006 TXNDC12O95881 172 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 MMP15P51511 669 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 NUTF2P61970 127 aaKnown RBP12.76□□□□□ -0.37
LIMD2-201ENST00000259006 DCDP81605 110 aaKnown RBP12.76□□□□□ -0.37
LIMD2-201ENST00000259006 PITPNAQ00169 270 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 DECR1Q16698 335 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 LRRC37A5PQ49AS3 106 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 TRMT12Q53H54 448 aaKnown RBP12.76□□□□□ -0.37
LIMD2-201ENST00000259006 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.76□□□□□ -0.37
LIMD2-201ENST00000259006 GID4Q8IVV7 300 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 ARMC10Q8N2F6 343 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 TMEM239Q8WW34 195 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 BPIFA2Q96DR5 249 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 RAB3CQ96E17 227 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 CLCC1Q96S66 551 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 ZPBPQ9BS86 351 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 CLDND1Q9NY35 253 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 C4orf47A7E2U8 309 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 RRP8O43159 456 aaKnown RBP12.76□□□□□ -0.37
LIMD2-201ENST00000259006 PAPLNO95428 1278 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 FGF19O95750 216 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 CXCL10P02778 98 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 RHOP08100 348 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 FBXO45P0C2W1 286 aa12.76□□□□□ -0.37
LIMD2-201ENST00000259006 HTR2AP28223 471 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms