RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 LIMS3P0CW19 117 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 LIMS4P0CW20 117 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 TFPIP10646 304 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 SHC1P29353 583 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 PEX19P40855 299 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 CDKN2AP42771 156 aaKnown RBP15.65■□□□□ 0.1
SRSF1-201ENST00000258962 SELENBP1Q13228 472 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 KRR1Q13601 381 aaKnown RBP15.65■□□□□ 0.1
SRSF1-201ENST00000258962 MED22Q15528 200 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 MESTQ5EB52 335 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 ARMC4Q5T2S8 1044 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 GHDCQ8N2G8 530 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 PROKR2Q8NFJ6 384 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 OR51G2Q8NGK0 314 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 JAM3Q9BX67 310 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 TMEM185BQ9H7F4 350 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 TIMMDC1Q9NPL8 285 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 INIPQ9NRY2 104 aa15.65■□□□□ 0.1
SRSF1-201ENST00000258962 CHCHD3Q9NX63 227 aaKnown RBP15.65■□□□□ 0.1
SRSF1-201ENST00000258962 EXOSC1Q9Y3B2 195 aaKnown RBP15.65■□□□□ 0.1
SRSF1-201ENST00000258962 PINLYPA6NC86 204 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 ZIC3O60481 467 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 CBR3O75828 277 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 SERPINI2O75830 405 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 GABARAPO95166 117 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 CD36P16671 472 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 MYL12AP19105 171 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 RPS7P62081 194 aaKnown RBP15.64■□□□□ 0.09
SRSF1-201ENST00000258962 MYBPHQ13203 477 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 CTF1Q16619 201 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 EMC4Q5J8M3 183 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 GPR139Q6DWJ6 353 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 LEG1Q6P5S2 330 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 GALNTL5Q7Z4T8 443 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 SCAIQ8N9R8 606 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 ZNRF4Q8WWF5 429 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 SCMH1Q96GD3 660 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 OPALINQ96PE5 141 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 MGLLQ99685 303 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 HES7Q9BYE0 225 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 TNFRSF10DQ9UBN6 386 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 GRHPRQ9UBQ7 328 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 DKKL1Q9UK85 242 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 ZNF346Q9UL40 294 aaKnown RBP15.64■□□□□ 0.09
SRSF1-201ENST00000258962 RPH3AQ9Y2J0 694 aaPredicted RBP15.64■□□□□ 0.09
SRSF1-201ENST00000258962 CORINQ9Y5Q5 1042 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 MED12Q93074 2177 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 HELZ2Q9BYK8 2649 aaKnown RBP15.64■□□□□ 0.09
SRSF1-201ENST00000258962 KIAA1549Q9HCM3 1950 aa15.64■□□□□ 0.09
SRSF1-201ENST00000258962 TMEM129A0AVI4 362 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 MS4A18H0YCH9 400 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 MYL12BO14950 172 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 SLC22A1O15245 554 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 RNF13O43567 381 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 IGHMP01871 453 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 OPN1LWP04000 364 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 NR4A1P22736 598 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 CD79BP40259 229 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 SLC16A1P53985 500 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 GPR85P60893 370 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 AQP6Q13520 282 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 MFSD13AQ14CX5 517 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 SPHARQ15513 63 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.63■□□□□ 0.092e-8■■■□□ 14.7
SRSF1-201ENST00000258962 MS4A18Q3C1V0 323 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 GLYR1Q49A26 553 aaPredicted RBP15.63■□□□□ 0.09
SRSF1-201ENST00000258962 ARMCX4Q5H9R4 360 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 OR2G6Q5TZ20 316 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 P2RY8Q86VZ1 359 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 JAZF1Q86VZ6 243 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 TMEM99Q8N816 258 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 ZNF519Q8TB69 540 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 SLC25A43Q8WUT9 341 aaPredicted RBP15.63■□□□□ 0.09
SRSF1-201ENST00000258962 TAAR6Q96RI8 345 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 ADGRL4Q9HBW9 690 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 ASB6Q9NWX5 421 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 ALKBH4Q9NXW9 302 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 HAO2Q9NYQ3 351 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 KLF13Q9Y2Y9 288 aaPredicted RBP15.63■□□□□ 0.09
SRSF1-201ENST00000258962 SPIN1Q9Y657 262 aaPredicted RBP15.63■□□□□ 0.09
SRSF1-201ENST00000258962 PRRC2CQ9Y520 2896 aaKnown RBP15.63■□□□□ 0.09
SRSF1-201ENST00000258962 OR2M5A3KFT3 312 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 KLRC4-KLRK1H3BQV0 150 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 NME2P1O60361 137 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 PLGP00747 810 aaPredicted RBP15.63■□□□□ 0.09
SRSF1-201ENST00000258962 HSMCR30P0CW71 290 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 SPI1P17947 270 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 CNR1P21554 472 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 NME2P22392 152 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 AHCYP23526 432 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 SLC25A1P53007 311 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 ROR2Q01974 943 aaKnown RBP15.63■□□□□ 0.09
SRSF1-201ENST00000258962 ZP4Q12836 540 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 C1DQ13901 141 aaKnown RBP15.63■□□□□ 0.09
SRSF1-201ENST00000258962 GGTLC2Q14390 218 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 ACKR1Q16570 336 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 H1FNTQ75WM6 255 aaPredicted RBP15.63■□□□□ 0.09
SRSF1-201ENST00000258962 ZNF485Q8NCK3 441 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 CHST11Q9NPF2 352 aa15.63■□□□□ 0.09
SRSF1-201ENST00000258962 ERVK13-1Q9NX77 482 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms