RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 MMP27Q9H306 513 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 SH2B3Q9UQQ2 575 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 TRIM64CA6NLI5 447 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 AHRRA9YTQ3 701 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 CXCL13O43927 109 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 CELP19835 753 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 ARF1P84077 181 aaKnown RBP12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 KCNG3Q8TAE7 436 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 DOK4Q8TEW6 326 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 APOBEC3DQ96AK3 386 aaPredicted RBP12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 RIMS4Q9H426 269 aaPredicted RBP12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 DIRAS1O95057 198 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 PEX11BO96011 259 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 CRHP06850 196 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 CSF1P09603 554 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 FOXA1P55317 472 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 PWWP2BQ6NUJ5 590 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 SDR9C7Q8NEX9 313 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 SORT1Q99523 831 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 PKP2Q99959 881 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 SLCO5A1Q9H2Y9 848 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 PTGDR2Q9Y5Y4 395 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 CITO14578 2027 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 PRICKLE3O43900 615 aaPredicted RBP12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 ICOSLGO75144 302 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 GABRB3P28472 473 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 F2RL1P55085 397 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 CYCSP99999 105 aaKnown RBP12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 RNASE10Q5GAN6 216 aaKnown RBP12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 GALNT10Q86SR1 603 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 SMIM14Q96QK8 99 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 KIAA1456Q9P272 454 aa12.27□□□□□ -0.45
PRPF38A-201ENST00000257181 FAM230AA0A1W2PPH8 454 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 G3V3Y1 287 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 NKX2-2O95096 273 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 EPHA1P21709 976 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 SEMA6DQ8NFY4 1073 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 DCSTAMPQ9H295 470 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 TCEAL2Q9H3H9 227 aaPredicted RBP12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 SIRT5Q9NXA8 310 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 ERRFI1Q9UJM3 462 aaPredicted RBP12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 ZNF281Q9Y2X9 895 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 HOXB1P14653 301 aaPredicted RBP12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 PGFP49763 221 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 FABP6P51161 128 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 ZNF45Q02386 682 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 OR5M10Q6IEU7 315 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 CYP4V2Q6ZWL3 525 aaPredicted RBP12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 PXKQ7Z7A4 578 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 STOML3Q8TAV4 291 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 CNOT9Q92600 299 aaKnown RBP12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 MAL2Q969L2 176 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 ZC3HAV1LQ96H79 300 aaKnown RBP12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 KATNB1Q9BVA0 655 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 KANTRA0A1W2PQU2 76 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 TRABD2BA6NFA1 517 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 ZNF593O00488 134 aaPredicted RBP12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 LGI1O95970 557 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 TK1P04183 234 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 GLAP06280 429 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 MXD1Q05195 221 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 RUNX2Q13950 521 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 DUSP5Q16690 384 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 LRRC10Q5BKY1 277 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 SLC36A1Q7Z2H8 476 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 OR2L13Q8N349 312 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 OR4K15Q8NH41 348 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 PSD2Q9BQI7 771 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 RNF32Q9H0A6 362 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 ZNF700Q9H0M5 742 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 TXNIPQ9H3M7 391 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 EMCNQ9ULC0 261 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 AMMECR1Q9Y4X0 333 aaPredicted RBP12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 ARRDC5A6NEK1 342 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 M0QZ24 198 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 TNFRSF21O75509 655 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 SOX3P41225 446 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 ZFP36L2P47974 494 aaKnown RBP12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 PPP1CAP62136 330 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 FCRLBQ6BAA4 426 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 ASCL5Q7RTU5 278 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 RAB40AQ8WXH6 277 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 KCNIP2Q9NS61 270 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 UCKL1Q9NWZ5 548 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 ANKRD10Q9NXR5 420 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 CTSFQ9UBX1 484 aa12.26□□□□□ -0.45
PRPF38A-201ENST00000257181 PRAMEF33A0A0G2JMD5 474 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 LAP3P28838 519 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 GDF7Q7Z4P5 450 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 SCCPDHQ8NBX0 429 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 LRRC20Q8TCA0 184 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 ELMOD3Q96FG2 381 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 OCSTAMPQ9BR26 566 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 PCDHGA3Q9Y5H0 932 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 ANKRD34BA5PLL1 514 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 NME4O00746 187 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 SH2D1BO14796 132 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 SULT1C4O75897 302 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 RGS19P49795 217 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 SLC25A35Q3KQZ1 300 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms