RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ZNF813Q6ZN06 617 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 NOXA1Q86UR1 476 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 UBALD2Q8IYN6 164 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 ENTHD1Q8IYW4 607 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 SCCPDHQ8NBX0 429 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 LGALS14Q8TCE9 139 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 APH1AQ96BI3 265 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 UBL7Q96S82 380 aaPredicted RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 LIN7BQ9HAP6 207 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 GNB4Q9HAV0 340 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 NECAP2Q9NVZ3 263 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 SYT5O00445 386 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 DSCR3O14972 297 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 PRICKLE3O43900 615 aaPredicted RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 AKR7A3O95154 331 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 B3GALT4O96024 378 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 SNRPBP14678 240 aaKnown RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 NFYAP23511 347 aaPredicted RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 FPR3P25089 353 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 SLC1A3P43003 542 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 KANSL1Q7Z3B3 1105 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 MAVSQ7Z434 540 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 CA13Q8N1Q1 262 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 OR2L13Q8N349 312 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 SLC22A24Q8N4F4 322 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 MAFAQ8NHW3 353 aaPredicted RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 MS4A6EQ96DS6 147 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 FAM117AQ9C073 453 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 PDFQ9HBH1 243 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 RPS10P5Q9NQ39 176 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 OR52A1Q9UKL2 312 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 EDARQ9UNE0 448 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 A0A1W2PQ09 198 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 SLC5A10A0PJK1 596 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 MTNR1BP49286 362 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 THBS3P49746 956 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF133P52736 654 aaPredicted RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 PPIAP62937 165 aaKnown RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 TEKQ02763 1124 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 BAXQ07812 192 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 CAMK2BQ13554 666 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 PLK5Q496M5 336 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 YIF1BQ5BJH7 314 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 OR52W1Q6IF63 320 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF767PQ75MW2 155 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 DCXRQ7Z4W1 244 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 LRRC56Q8IYG6 542 aaPredicted RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF687Q8N1G0 1237 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF808Q8N4W9 903 aaPredicted RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 AKAP11Q9UKA4 1901 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 LOXL2Q9Y4K0 774 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 ETV7Q9Y603 341 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 GABARAPH6UMI1 98 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 GPRIN2O60269 458 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 KCNK2O95069 426 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 GABARAPO95166 117 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 H1FNTQ75WM6 255 aaPredicted RBP8.02□□□□□ -1.13
PTCD3-201ENST00000254630 RBMXL3Q8N7X1 1067 aaKnown RBP8.02□□□□□ -1.13
PTCD3-201ENST00000254630 ABHD4Q8TB40 342 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 PSORS1C1Q9UIG5 152 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 DIMT1Q9UNQ2 313 aaKnown RBP8.02□□□□□ -1.13
PTCD3-201ENST00000254630 MED6O75586 246 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 GLCEO94923 617 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 GRPP07492 148 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 PEA15Q15121 130 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 ELAVL1Q15717 326 aaKnown RBP8.02□□□□□ -1.13
PTCD3-201ENST00000254630 LCN10Q6JVE6 187 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 SIRT6Q8N6T7 355 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 FGGYQ96C11 551 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 ARRDC1-AS1Q9H2J1 176 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 GLTPQ9NZD2 209 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 RCE1Q9Y256 329 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 HSBP1L1C9JCN9 74 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 PRRT4C9JH25 899 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 NXPH3O95157 252 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 C21orf33P30042 268 aaPredicted RBP8.02□□□□□ -1.13
PTCD3-201ENST00000254630 SYT13Q7L8C5 426 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 GRINAQ7Z429 371 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 OR2T35Q8NGX2 323 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 SLC38A1Q9H2H9 487 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 OR8G1Q15617 311 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 PAN3Q58A45 887 aaKnown RBP8.02□□□□□ -1.13
PTCD3-201ENST00000254630 Q6ZTK2 550 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 NAXDQ8IW45 347 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 MORN4Q8NDC4 146 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 WBP2Q969T9 261 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 UTP4Q969X6 686 aaKnown RBP8.02□□□□□ -1.13
PTCD3-201ENST00000254630 RTL8AQ9BWD3 113 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 MFFQ9GZY8 342 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 CHST11Q9NPF2 352 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 OR51B4Q9Y5P0 310 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 C4orf47A7E2U8 309 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 H7C1Q1 480 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 ARHGAP33O14559 1287 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 OR7C1O76099 320 aaPredicted RBP8.02□□□□□ -1.13
PTCD3-201ENST00000254630 SLC34A2O95436 690 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 IGLV3-27P01718 113 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 CR2P20023 1033 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 RPL27P61353 136 aaKnown RBP8.02□□□□□ -1.13
PTCD3-201ENST00000254630 SMN1Q16637 294 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms