RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 SELENOVP59797 346 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 EGR3Q06889 387 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 PXDC1Q5TGL8 231 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 VRK2Q86Y07 508 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 MCATQ8IVS2 390 aaKnown RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 COMMD1Q8N668 190 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 OR2AK2Q8NG84 335 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 OR10Z1Q8NGY1 313 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 PBDC1Q9BVG4 233 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 SORBS1Q9BX66 1292 aaKnown RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 PLA2G2FQ9BZM2 168 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 NKX2-4Q9H2Z4 354 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 B3GAT2Q9NPZ5 323 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 TM7SF3Q9NS93 570 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 SUSD2Q9UGT4 822 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 DHDHQ9UQ10 334 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 WNT6Q9Y6F9 365 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 TMEM82A0PJX8 343 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 OR6C65A6NJZ3 312 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 MCRIP1C9JLW8 97 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 NPIPB9F8W1W9 429 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 XRCC3O43542 346 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 PLRG1O43660 514 aaKnown RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 SSTR2P30874 369 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 CALCRP30988 508 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 DLSTP36957 453 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 HOXA1P49639 335 aaPredicted RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 SLC25A1P53007 311 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 DGCR2P98153 550 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 CDK3Q00526 305 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 ALKBH1Q13686 389 aaKnown RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF345Q14585 488 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 CDNFQ49AH0 187 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 IER5LQ5T953 404 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 SLC18B1Q6NT16 456 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 IL34Q6ZMJ4 242 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 ACOT7LQ6ZUV0 252 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 RBM45Q8IUH3 476 aaKnown RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 ARMC10Q8N2F6 343 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 OR4E2Q8NGC2 313 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 OR5AR1Q8NGP9 310 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 OR10K1Q8NGX5 313 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 OR6N1Q8NGY5 312 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 RHBDD1Q8TEB9 315 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 ZDHHC1Q8WTX9 485 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 HMGB4Q8WW32 186 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 MS4A6EQ96DS6 147 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF285Q96NJ3 590 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 S100A13Q99584 98 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 PLA2G12AQ9BZM1 189 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 CST11Q9H112 138 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 APMAPQ9HDC9 416 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 MBNL1Q9NR56 388 aaKnown RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 C19orf53Q9UNZ5 99 aaPredicted RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 THADAQ6YHU6 1953 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 C5orf51A6NDU8 294 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 BTBD17A6NE02 478 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 PRSS44E7EML9 344 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 ARPC3O15145 178 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 NARSO43776 548 aaKnown RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 IGFBP1P08833 259 aaPredicted RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 MRPL3P09001 348 aaKnown RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 TFPIP10646 304 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 CPMP14384 443 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 RIDAP52758 137 aaKnown RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 RPS21P63220 83 aaKnown RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 ST3GAL2Q16842 350 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 AVPI1Q5T686 147 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 FCRL6Q6DN72 434 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 FAHD2BQ6P2I3 314 aaPredicted RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 TMEM65Q6PI78 240 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 CFAP77Q6ZQR2 320 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 FCRLAQ7L513 359 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 DEFB119Q8N690 84 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 TMEM229BQ8NBD8 167 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 BVESQ8NE79 360 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 OR14A16Q8NHC5 309 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 FAHD2AQ96GK7 314 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 SYT4Q9H2B2 425 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 YARS2Q9Y2Z4 477 aaKnown RBP3.8□□□□□ -1.8
UBE4A-201ENST00000252108 OR1A2Q9Y585 309 aa3.8□□□□□ -1.8
UBE4A-201ENST00000252108 LOC100289279A0A1B0GTE1 492 aa3.79□□□□□ -1.8
UBE4A-201ENST00000252108 EPOPA6NHQ4 379 aa3.79□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF736B4DX44 427 aaPredicted RBP3.79□□□□□ -1.8
UBE4A-201ENST00000252108 WRBO00258 174 aa3.79□□□□□ -1.8
UBE4A-201ENST00000252108 CCL16O15467 120 aa3.79□□□□□ -1.8
UBE4A-201ENST00000252108 BCL2L11O43521 198 aa3.79□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF806P0C7X5 589 aa3.79□□□□□ -1.8
UBE4A-201ENST00000252108 HCCSP53701 268 aa3.79□□□□□ -1.8
UBE4A-201ENST00000252108 TAS2R20P59543 309 aa3.79□□□□□ -1.8
UBE4A-201ENST00000252108 EEF1A1P68104 462 aaKnown RBP3.79□□□□□ -1.8
UBE4A-201ENST00000252108 IGLV3-21P80748 117 aaPredicted RBP3.79□□□□□ -1.8
UBE4A-201ENST00000252108 GGTLC2Q14390 218 aa3.79□□□□□ -1.8
UBE4A-201ENST00000252108 TP53I3Q53FA7 332 aa3.79□□□□□ -1.8
UBE4A-201ENST00000252108 HES5Q5TA89 166 aa3.79□□□□□ -1.8
UBE4A-201ENST00000252108 TMEM244Q5VVB8 128 aa3.79□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF776Q68DI1 518 aaPredicted RBP3.79□□□□□ -1.8
UBE4A-201ENST00000252108 ABI3BPQ7Z7G0 1075 aa3.79□□□□□ -1.8
UBE4A-201ENST00000252108 TMEM185AQ8NFB2 350 aa3.79□□□□□ -1.8
UBE4A-201ENST00000252108 OR4Q3Q8NH05 313 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms