RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 NTHL1P78549 312 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 TAS1R1Q7RTX1 841 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 BAP18Q8IXM2 172 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 SLC39A11Q8N1S5 342 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 LHFPL5Q8TAF8 219 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 APH1BQ8WW43 257 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 A0A1W2PP55 124 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 CD300LBA8K4G0 201 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 BCL2L11O43521 198 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 NSA2O95478 260 aaKnown RBP12.75□□□□□ -0.37
HCFC2-201ENST00000229330 NME1P15531 152 aaKnown RBP12.75□□□□□ -0.37
HCFC2-201ENST00000229330 TACR3P29371 465 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 SSX1Q16384 188 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 WBP2NLQ6ICG8 309 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 NKAIN4Q8IVV8 208 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 OR4D10Q8NGI6 311 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 WDR92Q96MX6 357 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 SELENOIQ9C0D9 397 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 A0A0B4J203 849 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 DCTN6O00399 190 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 PMP2P02689 132 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 SERPINA2P20848 420 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 MRPL19P49406 292 aaKnown RBP12.75□□□□□ -0.37
HCFC2-201ENST00000229330 LIPIQ6XZB0 460 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 UEVLDQ8IX04 471 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 ZNF740Q8NDX6 193 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 WDR89Q96FK6 387 aaPredicted RBP12.75□□□□□ -0.37
HCFC2-201ENST00000229330 RNF170Q96K19 258 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 MS4A8Q9BY19 250 aa12.75□□□□□ -0.37
HCFC2-201ENST00000229330 GPR55Q9Y2T6 319 aaPredicted RBP12.75□□□□□ -0.37
HCFC2-201ENST00000229330 HRO43593 1189 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 AQP8O94778 261 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 KLF8O95600 359 aaPredicted RBP12.74□□□□□ -0.37
HCFC2-201ENST00000229330 PSMB6P28072 239 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 RPL34P49207 117 aaKnown RBP12.74□□□□□ -0.37
HCFC2-201ENST00000229330 IFITM3Q01628 133 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 GLYATL3Q5SZD4 288 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 TCTN3Q6NUS6 607 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 SLC43A2Q8N370 569 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 DUSP18Q8NEJ0 188 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 DDIT4LQ96D03 193 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 DTD2Q96FN9 168 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 TMEM100Q9NV29 134 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 CPED1A4D0V7 1026 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 LINC00862A6NCI5 91 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 RRASP10301 218 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 OMGP23515 440 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 RAB1AP62820 205 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 DEFB103AP81534 67 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 SLC35D3Q5M8T2 416 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 TMEM71Q6P5X7 295 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 GABRG1Q8N1C3 465 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 RBMXL1Q96E39 390 aaKnown RBP12.74□□□□□ -0.37
HCFC2-201ENST00000229330 ZNF681Q96N22 645 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 PLEKHA3Q9HB20 300 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 TNRC6CQ9HCJ0 1690 aaKnown RBP12.74□□□□□ -0.37
HCFC2-201ENST00000229330 IGLV3-10A0A075B6K4 115 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 OR2T1O43869 369 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 DFFBO76075 338 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 SLC2A10O95528 541 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 CPN1P15169 458 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 MRPS34P82930 218 aaKnown RBP12.74□□□□□ -0.37
HCFC2-201ENST00000229330 ST3GAL2Q16842 350 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 MPEG1Q2M385 716 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 OPN5Q6U736 354 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 GLDNQ6ZMI3 551 aaPredicted RBP12.74□□□□□ -0.37
HCFC2-201ENST00000229330 DPY19L2P2Q6ZN68 376 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 BPIFCQ8NFQ6 507 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 OR1J2Q8NGS2 313 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 HPSE2Q8WWQ2 592 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 LINC00052Q96N35 136 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 TOLLIPQ9H0E2 274 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 DKKL1Q9UK85 242 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 FBXO7Q9Y3I1 522 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 SIPA1L3O60292 1781 aaPredicted RBP12.74□□□□□ -0.37
HCFC2-201ENST00000229330 TMEM235A6NFC5 223 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 FGF9P31371 208 aaPredicted RBP12.74□□□□□ -0.37
HCFC2-201ENST00000229330 ZNF266Q14584 549 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 HLXQ14774 488 aaPredicted RBP12.74□□□□□ -0.37
HCFC2-201ENST00000229330 ZNF74Q16587 644 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 FAM219BQ5XKK7 198 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 ZNF620Q6ZNG0 422 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 SLC35D2Q76EJ3 337 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 DPY19L4Q7Z388 723 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 NAXDQ8IW45 347 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 PARP12Q9H0J9 701 aaKnown RBP12.74□□□□□ -0.37
HCFC2-201ENST00000229330 PATZ1Q9HBE1 687 aaKnown RBP12.74□□□□□ -0.37
HCFC2-201ENST00000229330 TAAR2Q9P1P5 351 aa12.74□□□□□ -0.37
HCFC2-201ENST00000229330 SELENOFO60613 162 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 HEXBP07686 556 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 TIMP2P16035 220 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 NQO2P16083 231 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 CLEC9AQ6UXN8 241 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 SYT9Q86SS6 491 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 FOXJ1Q92949 421 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 BTF3L4Q96K17 158 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 ZNF160Q9HCG1 818 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 ASH2LQ9UBL3 628 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 ZNF587BE7ETH6 402 aa12.73□□□□□ -0.37
HCFC2-201ENST00000229330 PRSS23O95084 383 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms