RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 CBR1P16152 277 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 CSNK1A1P48729 337 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 CYBRD1Q53TN4 286 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 ZNF813Q6ZN06 617 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 DNM1P46Q6ZS02 220 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 HIST3H2AQ7L7L0 130 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 NKAIN4Q8IVV8 208 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 MICU2Q8IYU8 434 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 PFN4Q8NHR9 129 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 TMEM255BQ8WV15 326 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 HIST1H2ACQ93077 130 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 TPD52L3Q96J77 140 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 LRR1Q96L50 414 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 ZNF426Q9BUY5 554 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 MEPEQ9NQ76 525 aaPredicted RBP12.36□□□□□ -0.43
GPN3-201ENST00000228827 CA10Q9NS85 328 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 CMTM6Q9NX76 183 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 ZNF229Q9UJW7 825 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 PMF1-BGLAPU3KQ54 211 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 USF3Q68DE3 2245 aa12.36□□□□□ -0.43
GPN3-201ENST00000228827 BLOC1S5-TXNDC5H3BN57 136 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 SLC22A2O15244 555 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 LY6HO94772 140 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 BMP4P12644 408 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 COX4I1P13073 169 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 PAX7P23759 505 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 KDELR2P33947 212 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 UGT2B15P54855 530 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 PPP2R2BQ00005 443 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 PIGFQ07326 219 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 KRTAP1-1Q07627 177 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 PIN1Q13526 163 aaPredicted RBP12.35□□□□□ -0.43
GPN3-201ENST00000228827 MST1LQ2TV78 715 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 KRTAP21-3Q3LHN1 58 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 C3orf36Q3SXR2 165 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 CLEC2AQ6UVW9 174 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 SLC46A3Q7Z3Q1 461 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 NANOGNBQ7Z5D8 188 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 ZNF525Q8N782 197 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 RP9Q8TA86 221 aaKnown RBP12.35□□□□□ -0.43
GPN3-201ENST00000228827 RHNO1Q9BSD3 238 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 SLC19A3Q9BZV2 496 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 NOX3Q9HBY0 568 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 RIMS3Q9UJD0 308 aa12.35□□□□□ -0.43
GPN3-201ENST00000228827 IGHV2OR16-5A0A0B4J2B6 119 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 ELOVL7A1L3X0 281 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 OR5F1O95221 314 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 OR4A8P0C604 315 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 ASAH2BP0C7U1 165 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 ARR3P36575 388 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 SERPINF1P36955 418 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 SNRPD2P62316 118 aaKnown RBP12.34□□□□□ -0.43
GPN3-201ENST00000228827 HGFACQ04756 655 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 ZP4Q12836 540 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 ADIPOQQ15848 244 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 SWI5Q1ZZU3 235 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 CCDC36Q8IYA8 594 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 FAM169BQ8N8A8 192 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 OR4F15Q8NGB8 312 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 FOXB1Q99853 325 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 MOV10Q9HCE1 1003 aaKnown RBP12.34□□□□□ -0.43
GPN3-201ENST00000228827 ARID1AO14497 2285 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 PIP5K1CO60331 668 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 MT-ND1P03886 318 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 FUT1P19526 365 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 EFNA4P52798 201 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 LIPEQ05469 1076 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 KRT80Q6KB66 452 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 SLC15A3Q8IY34 581 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 OR10H5Q8NGA6 315 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 OR6X1Q8NH79 312 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 TMEM239Q8WW34 195 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 TMEM54Q969K7 222 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 ZNF566Q969W8 418 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 SGTBQ96EQ0 304 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 MS4A3Q96HJ5 214 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 VRK1Q99986 396 aaPredicted RBP12.34□□□□□ -0.43
GPN3-201ENST00000228827 POLR2J2Q9GZM3 115 aaKnown RBP12.34□□□□□ -0.43
GPN3-201ENST00000228827 POLR2J3Q9H1A7 115 aaKnown RBP12.34□□□□□ -0.43
GPN3-201ENST00000228827 C20orf141Q9NUB4 165 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 B3GNT2Q9NY97 397 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 GLTPQ9NZD2 209 aa12.34□□□□□ -0.43
GPN3-201ENST00000228827 GSTA4O15217 222 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 GPRIN2O60269 458 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 CCDC22O60826 627 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 OR7A10O76100 309 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 BCL10O95999 233 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 TP53P04637 393 aaPredicted RBP12.33□□□□□ -0.44
GPN3-201ENST00000228827 F13BP05160 661 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 PATE4P0C8F1 98 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 THBS4P35443 961 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 AQP2P41181 271 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 RBM34P42696 430 aaKnown RBP12.33□□□□□ -0.44
GPN3-201ENST00000228827 YAP1P46937 504 aaKnown RBP12.33□□□□□ -0.44
GPN3-201ENST00000228827 PTDSS1P48651 473 aaKnown RBP12.33□□□□□ -0.44
GPN3-201ENST00000228827 SLC7A2P52569 658 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 SELENOWP63302 87 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 RPL18Q07020 188 aaKnown RBP12.33□□□□□ -0.44
GPN3-201ENST00000228827 GSG1Q2KHT4 349 aa12.33□□□□□ -0.44
GPN3-201ENST00000228827 VTCN1Q7Z7D3 282 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms