RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 SF3B5Q9BWJ5 86 aaKnown RBP15.57■□□□□ 0.08
PHGDH-230ENST00000641927 TXNIPQ9H3M7 391 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 FANCFQ9NPI8 374 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 KLHL9Q9P2J3 617 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 KDM4EB2RXH2 506 aaPredicted RBP15.57■□□□□ 0.08
PHGDH-230ENST00000641927 WDR1O75083 606 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 SDHAP31040 664 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 GRK5P34947 590 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 CLDN17P56750 224 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 RPL27P61353 136 aaKnown RBP15.57■□□□□ 0.08
PHGDH-230ENST00000641927 IL5RAQ01344 420 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 RNPS1Q15287 305 aaKnown RBP15.57■□□□□ 0.08
PHGDH-230ENST00000641927 C12orf73Q69YU5 71 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 GTF2IRD2BQ6EKJ0 949 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 C3P1Q6ZMU1 363 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 CREB3L2Q70SY1 520 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 FAM122BQ7Z309 247 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 GTF2IRD2Q86UP8 949 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 OR52E2Q8NGJ4 325 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 OR4K13Q8NH42 304 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 OTULINQ96BN8 352 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 TXNDC15Q96J42 360 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 CNBD2Q96M20 576 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 EMC6Q9BV81 110 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 CLEC4AQ9UMR7 237 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 EPG5Q9HCE0 2579 aa15.57■□□□□ 0.08
PHGDH-230ENST00000641927 LOC102725191A0A1B0GVB3 256 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 RIIAD1A6NNX1 92 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 ZNF716A6NP11 495 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 XKRYO14609 159 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 ARPC3O15145 178 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 TRAF3IP2O43734 574 aaPredicted RBP15.56■□□□□ 0.08
PHGDH-230ENST00000641927 IDH3BO43837 385 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 SLC2A10O95528 541 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 HIST1H1CP16403 213 aaKnown RBP15.56■□□□□ 0.08
PHGDH-230ENST00000641927 ACVR2AP27037 513 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 ACVR1BP36896 505 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 BIDP55957 195 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 POU4F3Q15319 338 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 ZNF691Q5VV52 312 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 GPR139Q6DWJ6 353 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 PTCHD4Q6ZW05 846 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 JAZF1Q86VZ6 243 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 CCDC71Q8IV32 467 aaPredicted RBP15.56■□□□□ 0.08
PHGDH-230ENST00000641927 C8orf59Q8N0T1 100 aaPredicted RBP15.56■□□□□ 0.08
PHGDH-230ENST00000641927 DEPDC4Q8N2C3 294 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 SETD9Q8NE22 299 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 UBE2FQ969M7 185 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 IL4I1Q96RQ9 567 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 RASSF1Q9NS23 344 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 CLCF1Q9UBD9 225 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 SH3BGRL2Q9UJC5 107 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 GPR52Q9Y2T5 361 aa15.56■□□□□ 0.08
PHGDH-230ENST00000641927 SURF4O15260 269 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 ARHGEF9O43307 516 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 IFNGP01579 166 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 IGHMP01871 453 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 APEHP13798 732 aaKnown RBP15.55■□□□□ 0.08
PHGDH-230ENST00000641927 PTGER4P35408 488 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 PCYT1AP49585 367 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.55■□□□□ 0.08
PHGDH-230ENST00000641927 IL18R1Q13478 541 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 KRR1Q13601 381 aaKnown RBP15.55■□□□□ 0.08
PHGDH-230ENST00000641927 C1orf185Q5T7R7 199 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 ADGRE4PQ86SQ3 457 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 ARIH2OSQ8N7S6 290 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 TCEANCQ8N8B7 351 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 ST6GALNAC3Q8NDV1 305 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 SDR9C7Q8NEX9 313 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 ASB10Q8WXI3 467 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 ZNF385AQ96PM9 386 aaKnown RBP15.55■□□□□ 0.08
PHGDH-230ENST00000641927 CALHM2Q9HA72 323 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 EMC3Q9P0I2 261 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 FLVCR1Q9Y5Y0 555 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 GTF3C1Q12789 2109 aa15.55■□□□□ 0.08
PHGDH-230ENST00000641927 ZNF726A6NNF4 738 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 E9PQ18 207 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 H7C1C5 153 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 IMPA2O14732 288 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 TLX2O43763 284 aaPredicted RBP15.54■□□□□ 0.08
PHGDH-230ENST00000641927 PRKYO43930 277 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 ZNF3P17036 446 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 SLC16A1P53985 500 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 LCN6P62502 163 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 MESTQ5EB52 335 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 ARMC4Q5T2S8 1044 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 CARD17Q5XLA6 110 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 NSUN5P2Q63ZY6 315 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 DOLPP1Q86YN1 238 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 TUSC5Q8IXB3 177 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 WNT2BQ93097 391 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 NMNAT3Q96T66 252 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 ANKRD60Q9BZ19 345 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 TP63Q9H3D4 680 aaPredicted RBP15.54■□□□□ 0.08
PHGDH-230ENST00000641927 RNF122Q9H9V4 155 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 CMC2Q9NRP2 79 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 KLHL21Q9UJP4 597 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 TINAGQ9UJW2 476 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 SLC35F4A4IF30 521 aa15.54■□□□□ 0.08
PHGDH-230ENST00000641927 A6NIZ1 184 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms