RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 ADORA3P0DMS8 318 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 CLUP10909 449 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 HIST1H1CP16403 213 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 HTR1FP30939 366 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 DSCR4P56555 118 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 RPL18Q07020 188 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 RAB40BQ12829 278 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 CRMP1Q14194 572 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 MFSD13AQ14CX5 517 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 CNPY1Q3B7I2 92 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 UBE2UQ5VVX9 321 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 C3orf33Q6P1S2 294 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 NIPAL3Q6P499 406 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 PLBD1Q6P4A8 553 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 PAQR6Q6TCH4 344 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 B3GLCTQ6Y288 498 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 B3GNT6Q6ZMB0 384 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 SLC16A12Q6ZSM3 486 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 CLVS1Q8IUQ0 354 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 CYB561A3Q8NBI2 242 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 OR52I1Q8NGK6 324 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 OR5M1Q8NGP8 315 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 OR5J2Q8NH18 312 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 OR6S1Q8NH40 331 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 ZNRF4Q8WWF5 429 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 LGALS12Q96DT0 336 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 RNFT2Q96EX2 444 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 TMEM41AQ96HV5 264 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 JSRP1Q96MG2 331 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 ZNF649Q9BS31 505 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 LRFN1Q9P244 771 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 CLEC2DQ9UHP7 191 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 KLHL21Q9UJP4 597 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 LSM2Q9Y333 95 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 SLC6A5Q9Y345 797 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 PINLYPA6NC86 204 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 CCDC182A6NF36 153 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 LRRC3CA6NJW4 275 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 H3BML4 177 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 J3QRE1 110 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 M0R082 166 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 ZIC3O60481 467 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 CBR3O75828 277 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 NEURL1O76050 574 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 RAB36O95755 333 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 F10P00742 488 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 CD14P08571 375 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 TFPIP10646 304 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 IMPDH2P12268 514 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 APEHP13798 732 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 TCEA1P23193 301 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 FKBP2P26885 142 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 DPP4P27487 766 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 DCKP27707 260 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 PSMB9P28065 219 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 GTF2E2P29084 291 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 SHC1P29353 583 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 CD96P40200 585 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 DNASE1L1P49184 302 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 CTXN1P60606 82 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 ERVK-25P63136 954 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 ITGADQ13349 1161 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 SGCBQ16585 318 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 TIGD3Q6B0B8 471 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 FAM98AQ8NCA5 519 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 SLC37A3Q8NCC5 494 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 NPEPL1Q8NDH3 523 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 ATP6V1C2Q8NEY4 427 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 OR52E2Q8NGJ4 325 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 OR4K13Q8NH42 304 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 MFSD8Q8NHS3 518 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 RASD2Q96D21 266 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 SIGLEC12Q96PQ1 595 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 OR5M11Q96RB7 305 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 DOK1Q99704 481 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 ASPNQ9BXN1 380 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 POTEKPQ9BYX7 375 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 TIMMDC1Q9NPL8 285 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 KLHL1Q9NR64 748 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 WARS2Q9UGM6 360 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 RSL24D1Q9UHA3 163 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 DKKL1Q9UK85 242 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 DIMT1Q9UNQ2 313 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 CORINQ9Y5Q5 1042 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 ITPR2Q14571 2701 aa8.53□□□□□ -1.04
PDLIM5-223ENST00000627587 HIVEP3Q5T1R4 2406 aa8.52□□□□□ -1.04
PDLIM5-223ENST00000627587 DOPEY1Q5JWR5 2465 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 PRRC2CQ9Y520 2896 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 NBPF19A0A087WUL8 3843 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 TRIM64BA6NI03 449 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 SLC22A31A6NKX4 558 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 VGLL3A8MV65 326 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 NOL3O60936 208 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 OR6A2O95222 327 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 F13BP05160 661 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 COL8A1P27658 744 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 PCSK6P29122 969 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 GRPRP30550 384 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 SDHAP31040 664 aa8.52□□□□□ -1.05
PDLIM5-223ENST00000627587 IDUAP35475 653 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms