RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 RIIAD1A6NNX1 92 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 ZNHIT1O43257 154 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 IDH3BO43837 385 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 PRKYO43930 277 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 SYNGR4O95473 234 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 SLC2A10O95528 541 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 APEHP13798 732 aaKnown RBP15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 C1DQ13901 141 aaKnown RBP15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 MAD2L1BPQ15013 274 aaPredicted RBP15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 ACKR1Q16570 336 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 ST3GAL2Q16842 350 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 KRTCAP3Q53RY4 240 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 ZNF324BQ6AW86 544 aaPredicted RBP15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 FAM122BQ7Z309 247 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 OR8J1Q8NGP2 316 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 CNIH3Q8TBE1 160 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 FAR1Q8WVX9 515 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 RASD2Q96D21 266 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 Q96M85 177 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 TXNIPQ9H3M7 391 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 FANCFQ9NPI8 374 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 GPR52Q9Y2T5 361 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 NOX1Q9Y5S8 564 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 SPTA1P02549 2419 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 TEX13CA0A0J9YWL9 993 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 TLX2O43763 284 aaPredicted RBP15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 MPZL2O60487 215 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 VAMP5O95183 116 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 IFNGP01579 166 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 HIST1H1CP16403 213 aaKnown RBP15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 SDHAP31040 664 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 GPR139Q6DWJ6 353 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 OR4K13Q8NH42 304 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 RHOXF1Q8NHV9 184 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 TRUB1Q8WWH5 349 aaKnown RBP15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 TUBA1CQ9BQE3 449 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 PRDM14Q9GZV8 571 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 CMC2Q9NRP2 79 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 KLHL21Q9UJP4 597 aa15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 ZNF346Q9UL40 294 aaKnown RBP15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 MCTS1Q9ULC4 181 aaKnown RBP15.91■□□□□ 0.14
PTCHD3-202ENST00000622555 ATRXP46100 2492 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 USP24Q9UPU5 2620 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 OR14I1A6ND48 311 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 IMPA2O14732 288 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 IGHMP01871 453 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 IFNGR1P15260 489 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 ZNF43P17038 809 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 DAP3P51398 398 aaKnown RBP15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 RPL27P61353 136 aaKnown RBP15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 KRR1Q13601 381 aaKnown RBP15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 MELKQ14680 651 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 PON3Q15166 354 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 PRR30Q53SZ7 412 aaPredicted RBP15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 SLC35D2Q76EJ3 337 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 FCRLAQ7L513 359 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 JAZF1Q86VZ6 243 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 PM20D2Q8IYS1 436 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 OR52E2Q8NGJ4 325 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 TMEM163Q8TC26 289 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 SNRNP40Q96DI7 357 aaKnown RBP15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 TSC22D3Q99576 134 aa15.9■□□□□ 0.14
PTCHD3-202ENST00000622555 ITPR1Q14643 2758 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 LOC102725191A0A1B0GVB3 256 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 TXNDC12O95881 172 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 BCL10O95999 233 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 ZNF3P17036 446 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 GABRB1P18505 474 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 ACVR1BP36896 505 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 CDH15P55291 814 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 SNRPGP62308 76 aaKnown RBP15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 CDK5R2Q13319 367 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 EMC4Q5J8M3 183 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 ABLIM2Q6H8Q1 611 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 PLXDC2Q6UX71 529 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 SDR9C7Q8NEX9 313 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 OR5M9Q8NGP3 310 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 FBLIM1Q8WUP2 373 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 APH1BQ8WW43 257 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 PRRG4Q9BZD6 226 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 MED29Q9NX70 200 aa15.89■□□□□ 0.13
PTCHD3-202ENST00000622555 CLCA1A8K7I4 914 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 EFNB1P98172 346 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 SLC17A1Q14916 467 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 MESTQ5EB52 335 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 EEF1A1P5Q5VTE0 462 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 PCSK4Q6UW60 755 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 FGD2Q7Z6J4 655 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 ARIH2OSQ8N7S6 290 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 CYB561A3Q8NBI2 242 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 OR9K2Q8NGE7 335 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 FNDC9Q8TBE3 224 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 OTULINQ96BN8 352 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 TXNDC15Q96J42 360 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 LRR1Q96L50 414 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 SF3B5Q9BWJ5 86 aaKnown RBP15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 ASF1BQ9NVP2 202 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 CLN6Q9NWW5 311 aa15.88■□□□□ 0.13
PTCHD3-202ENST00000622555 DNAJC27Q9NZQ0 273 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms