RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 ATP6V0D1P61421 351 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 ERVS71-1P61550 626 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 SLC35A1P78382 337 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 COX10Q12887 443 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 MOGQ16653 247 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 KLHL26Q53HC5 615 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 GPAT4Q86UL3 456 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 KLBQ86Z14 1044 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 C1orf52Q8N6N3 182 aaKnown RBP8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 LRRC57Q8N9N7 239 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 CDRT4Q8N9R6 151 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 EPS8L3Q8TE67 593 aaKnown RBP8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 WIPF2Q8TF74 440 aaPredicted RBP8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 NSMAFQ92636 917 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 LHX4Q969G2 390 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 SF3B5Q9BWJ5 86 aaKnown RBP8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 LINC00470Q9BZP3 86 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 SEMA6AQ9H2E6 1030 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 GIN1Q9NXP7 522 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 RCE1Q9Y256 329 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 KMT2AQ03164 3969 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 PKHD1P08F94 4074 aa8.37□□□□□ -1.07
AP003900.1-202ENST00000616952 ZSCAN5BA6NJL1 495 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 SMTNL1A8MU46 457 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 MIF4GDA9UHW6 222 aaKnown RBP8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 ZNF879B4DU55 563 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 SUPT3HB4E1H0 165 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 RPL36A-HNRNPH2H7BZ11 118 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 ZNF264O43296 627 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 ENSAO43768 121 aaKnown RBP8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 RAMP3O60896 148 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 SLC43A1O75387 559 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 SUPT3HO75486 399 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 WISP3O95389 354 aaPredicted RBP8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 HSPA4LO95757 839 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 CLIC3O95833 236 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 ACP2P11117 423 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 UBL4AP11441 157 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 FAHP16930 419 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 SLC6A2P23975 617 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 IVDP26440 423 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 APOBEC1P41238 236 aaKnown RBP8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 CLK1P49759 484 aaKnown RBP8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 VEGFCP49767 419 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 PIGFQ07326 219 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 DUSP5Q16690 384 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 SPRNQ5BIV9 151 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 SPANXN3Q5MJ09 141 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 NIPAL3Q6P499 406 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 LRIG3Q6UXM1 1119 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 UNQ9370/PRO34162Q6UXP9 181 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 NHLRC1Q6VVB1 395 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 ZC3HC1Q86WB0 502 aaKnown RBP8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 ZNF101Q8IZC7 436 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 ZNF283Q8N7M2 679 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 ZNF614Q8N883 585 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 LINC00482Q8N8I6 264 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 COX18Q8N8Q8 333 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 ZNF519Q8TB69 540 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 TMEM234Q8WY98 164 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 C11orf40Q8WZ69 217 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 PRR25Q96S07 402 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 BPIFA3Q9BQP9 254 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 CCDC106Q9BWC9 280 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 NAT10Q9H0A0 1025 aaKnown RBP8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 OR51B6Q9H340 312 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 PIF1Q9H611 641 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 ZMAT4Q9H898 229 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 CTPS2Q9NRF8 586 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 ACER3Q9NUN7 267 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 GPR45Q9Y5Y3 372 aa8.36□□□□□ -1.07
AP003900.1-202ENST00000616952 C22orf46C9J442 243 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 UBXN8O00124 270 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 EIF4E2O60573 245 aaKnown RBP8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 DNAJA2O60884 412 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 RAB36O95755 333 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 IGHV3-13P01766 116 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 LCKP06239 509 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 IMPDH2P12268 514 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 CRHR1P34998 444 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 ARL1P40616 181 aaPredicted RBP8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 TBX2Q13207 712 aaPredicted RBP8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 SKP2Q13309 424 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 HEPACAMQ14CZ8 416 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 RASA2Q15283 850 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 TTC19Q6DKK2 380 aaPredicted RBP8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 PEX26Q7Z412 305 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 OTUB1Q96FW1 271 aaPredicted RBP8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 SIGLEC11Q96RL6 698 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 THUMPD3Q9BV44 507 aaKnown RBP8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 GLIPR2Q9H4G4 154 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 IPPKQ9H8X2 491 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 SERTAD4Q9NUC0 356 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 RNF14Q9UBS8 474 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 CAB39Q9Y376 341 aaPredicted RBP8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 PSAT1Q9Y617 370 aa8.35□□□□□ -1.07
AP003900.1-202ENST00000616952 PLSCR5A0PG75 271 aa8.34□□□□□ -1.07
AP003900.1-202ENST00000616952 ANKRD28O15084 1053 aa8.34□□□□□ -1.07
AP003900.1-202ENST00000616952 ZNF500O60304 480 aaPredicted RBP8.34□□□□□ -1.07
AP003900.1-202ENST00000616952 ADH4P08319 380 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms