RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 MEPEQ9NQ76 525 aaPredicted RBP13.2□□□□□ -0.3
UBXN1-218ENST00000616865 SLC22A20A6NK97 555 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 SAC3D1A6NKF1 404 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 DEFB108AA8MXU0 73 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 G3V2T6 193 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 H7C1Q1 480 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 MSTNO14793 375 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 AKR7A3O95154 331 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 TGM6O95932 706 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 IGF2P01344 180 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 BGLAPP02818 100 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 FCGR2AP12318 317 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 ANPEPP15144 967 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 FUT1P19526 365 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 GRPRP30550 384 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 LIMS1P48059 325 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 PCYT1AP49585 367 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 CTBP2P56545 445 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 PMS2P3Q13401 168 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 PON3Q15166 354 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 ZNF74Q16587 644 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 OTUD3Q5T2D3 398 aaPredicted RBP13.19□□□□□ -0.3
UBXN1-218ENST00000616865 HMBOX1Q6NT76 420 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 SHQ1Q6PI26 577 aaKnown RBP13.19□□□□□ -0.3
UBXN1-218ENST00000616865 NANOGNBQ7Z5D8 188 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 MEX3DQ86XN8 651 aaKnown RBP13.19□□□□□ -0.3
UBXN1-218ENST00000616865 ATG16L2Q8NAA4 619 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 AQP11Q8NBQ7 271 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 OR9Q2Q8NGE9 314 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 NRBF2Q96F24 287 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 ZNF845Q96IR2 970 aaPredicted RBP13.19□□□□□ -0.3
UBXN1-218ENST00000616865 ADGRG7Q96K78 797 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 FUZQ9BT04 418 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 PTDSS2Q9BVG9 487 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 SRXN1Q9BYN0 137 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 C20orf141Q9NUB4 165 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 ZNF229Q9UJW7 825 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 MGAT4BQ9UQ53 548 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 CORINQ9Y5Q5 1042 aa13.19□□□□□ -0.3
UBXN1-218ENST00000616865 IGHV3-15A0A0B4J1V0 119 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 LRRN3E7EW58 273 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 M0R082 166 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 SMNDC1O75940 238 aaKnown RBP eCLIP13.18□□□□□ -0.33e-7■□□□□ 8.2
UBXN1-218ENST00000616865 FAM27E3Q08E93 113 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 ZNF239Q16600 458 aaKnown RBP13.18□□□□□ -0.3
UBXN1-218ENST00000616865 GTF2IRD2BQ6EKJ0 949 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 TMEM225Q6GV28 225 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 PRSS57Q6UWY2 283 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 H1FNTQ75WM6 255 aaPredicted RBP13.18□□□□□ -0.3
UBXN1-218ENST00000616865 TMEM179BQ7Z7N9 219 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 OAFQ86UD1 273 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 GTF2IRD2Q86UP8 949 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 STK32CQ86UX6 486 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 OR5J2Q8NH18 312 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 ZNF417Q8TAU3 575 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 ROBO4Q8WZ75 1007 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 GTPBP3Q969Y2 492 aaKnown RBP13.18□□□□□ -0.3
UBXN1-218ENST00000616865 MOGAT1Q96PD6 335 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 ZNF587Q96SQ5 575 aaPredicted RBP13.18□□□□□ -0.3
UBXN1-218ENST00000616865 NTN4Q9HB63 628 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 ZNF175Q9Y473 711 aa13.18□□□□□ -0.3
UBXN1-218ENST00000616865 ARRDC5A6NEK1 342 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 UNC119BA6NIH7 251 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 BLOC1S5-TXNDC5H3BN57 136 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 PLGP00747 810 aaPredicted RBP13.17□□□□□ -0.3
UBXN1-218ENST00000616865 CRHP06850 196 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 ANXA8P13928 327 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 POU2F1P14859 743 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 MAKP20794 623 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 CRYGSP22914 178 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 CCKARP32238 428 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 CD79BP40259 229 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 OMPP47874 163 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 SLC9A3P48764 834 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 LSM11P83369 360 aaKnown RBP eCLIP13.17□□□□□ -0.3
UBXN1-218ENST00000616865 ACKR1Q16570 336 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 OR2A2Q6IF42 318 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 PGBD2Q6P3X8 592 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 VWA1Q6PCB0 445 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 PAQR6Q6TCH4 344 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 TMPRSS11FQ6ZWK6 438 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 FCRLAQ7L513 359 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 SLC46A3Q7Z3Q1 461 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 SLC43A2Q8N370 569 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 LRRC17Q8N6Y2 441 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 TMEM99Q8N816 258 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 SCAIQ8N9R8 606 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 FNDC9Q8TBE3 224 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 STARD4Q96DR4 205 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 PIK3IP1Q96FE7 263 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 WFIKKN1Q96NZ8 548 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 FEVQ99581 238 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 CCL19Q99731 98 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 UBTD1Q9HAC8 227 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 MRPL39Q9NYK5 338 aaKnown RBP13.17□□□□□ -0.3
UBXN1-218ENST00000616865 ZNF226Q9NYT6 803 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 OAZ3Q9UMX2 235 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 FBN3Q75N90 2809 aa13.17□□□□□ -0.3
UBXN1-218ENST00000616865 KIAA1324LA8MWY0 1029 aaPredicted RBP13.16□□□□□ -0.3
UBXN1-218ENST00000616865 FTCDNL1E5RQL4 147 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms