RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 CPNE4Q96A23 557 aaPredicted RBP15.68■□□□□ 0.1
SREK1-216ENST00000612404 NMNAT3Q96T66 252 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 MED20Q9H944 212 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 B3GAT1Q9P2W7 334 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 CAMK2AQ9UQM7 478 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 RASD1Q9Y272 281 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 NOX1Q9Y5S8 564 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 KIAA1549Q9HCM3 1950 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 PRR23D1E9PI22 279 aaPredicted RBP15.68■□□□□ 0.1
SREK1-216ENST00000612404 SLC1A7O00341 560 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 XKRYO14609 159 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 IMPA2O14732 288 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 SMAD9O15198 467 aaKnown RBP15.68■□□□□ 0.1
SREK1-216ENST00000612404 FAM20BO75063 409 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 PRR23D2P0DMB1 279 aaPredicted RBP15.68■□□□□ 0.1
SREK1-216ENST00000612404 ZNF43P17038 809 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 PAICSP22234 425 aaKnown RBP15.68■□□□□ 0.1
SREK1-216ENST00000612404 ACVR2AP27037 513 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 ACVR1BP36896 505 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 ITGADQ13349 1161 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 KRR1Q13601 381 aaKnown RBP15.68■□□□□ 0.1
SREK1-216ENST00000612404 EMC4Q5J8M3 183 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 RBM48Q5RL73 367 aaKnown RBP15.68■□□□□ 0.1
SREK1-216ENST00000612404 FAM180AQ6UWF9 173 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 SLC35D2Q76EJ3 337 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 CHMP1BQ7LBR1 199 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 SLC37A3Q8NCC5 494 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 ROBO4Q8WZ75 1007 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 ZNF582Q96NG8 517 aaPredicted RBP15.68■□□□□ 0.1
SREK1-216ENST00000612404 OXGR1Q96P68 337 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 HINT3Q9NQE9 182 aaKnown RBP15.68■□□□□ 0.1
SREK1-216ENST00000612404 MED29Q9NX70 200 aa15.68■□□□□ 0.1
SREK1-216ENST00000612404 SPTA1P02549 2419 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 TXNDC12O95881 172 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 BCL10O95999 233 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 EEF1B2P24534 225 aaKnown RBP15.67■□□□□ 0.1
SREK1-216ENST00000612404 DAP3P51398 398 aaKnown RBP15.67■□□□□ 0.1
SREK1-216ENST00000612404 DBPQ10586 325 aaPredicted RBP15.67■□□□□ 0.1
SREK1-216ENST00000612404 ZNF239Q16600 458 aaKnown RBP15.67■□□□□ 0.1
SREK1-216ENST00000612404 OCLNQ16625 522 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 MESTQ5EB52 335 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 MEDAGQ5VYS4 303 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 LEG1Q6P5S2 330 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 ARIH2OSQ8N7S6 290 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 WDYHV1Q96HA8 205 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 FANCFQ9NPI8 374 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 SCN3BQ9NY72 215 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 H2AFY2Q9P0M6 372 aaPredicted RBP15.67■□□□□ 0.1
SREK1-216ENST00000612404 MAGEA13PA6NCF6 341 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 PTGES3LE9PB15 166 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 H7C1C5 153 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 ZNHIT1O43257 154 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 ARHGEF9O43307 516 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 VAMP5O95183 116 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 IGHMP01871 453 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 CRHBPP24387 322 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 CDKN2AP42771 156 aaKnown RBP15.67■□□□□ 0.1
SREK1-216ENST00000612404 LCN6P62502 163 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 TEKQ02763 1124 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 TMEM201Q5SNT2 666 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 SLC25A30Q5SVS4 291 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 TEX19Q8NA77 164 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 Q8NA96 180 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 BBS1Q8NFJ9 593 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 TXNDC15Q96J42 360 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 YTHDF1Q9BYJ9 559 aaKnown RBP15.67■□□□□ 0.1
SREK1-216ENST00000612404 FN3KQ9H479 309 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 BLOC1S6Q9UL45 172 aa15.67■□□□□ 0.1
SREK1-216ENST00000612404 A0A1B0GTH9 108 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 A0A1B0GVC2 190 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 SH3D21A4FU49 640 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 NPIPA2E9PIF3 369 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 NPIPA3F8WFD2 350 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 AQP7O14520 342 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 SYNGR4O95473 234 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 CPN1P15169 458 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 CXCR4P61073 352 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 EXD3Q8N9H8 876 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 NPEPL1Q8NDH3 523 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 ZNF540Q8NDQ6 660 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 OR9Q1Q8NGQ5 310 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 ZPLD1Q8TCW7 415 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 HCAR1Q9BXC0 346 aa15.66■□□□□ 0.1
SREK1-216ENST00000612404 PAQR5Q9NXK6 330 aaPredicted RBP15.66■□□□□ 0.1
SREK1-216ENST00000612404 CCDC159P0C7I6 412 aa15.65■□□□□ 0.1
SREK1-216ENST00000612404 BIDP55957 195 aa15.65■□□□□ 0.1
SREK1-216ENST00000612404 KLHL12Q53G59 568 aa15.65■□□□□ 0.1
SREK1-216ENST00000612404 EEF1A1P5Q5VTE0 462 aa15.65■□□□□ 0.1
SREK1-216ENST00000612404 NXNL2Q5VZ03 156 aa15.65■□□□□ 0.1
SREK1-216ENST00000612404 PLXDC2Q6UX71 529 aa15.65■□□□□ 0.1
SREK1-216ENST00000612404 FCRLAQ7L513 359 aa15.65■□□□□ 0.1
SREK1-216ENST00000612404 CISD2Q8N5K1 135 aaKnown RBP15.65■□□□□ 0.1
SREK1-216ENST00000612404 ZNF519Q8TB69 540 aa15.65■□□□□ 0.1
SREK1-216ENST00000612404 ASB10Q8WXI3 467 aa15.65■□□□□ 0.1
SREK1-216ENST00000612404 PTP4A1Q93096 173 aa15.65■□□□□ 0.1
SREK1-216ENST00000612404 ZNF566Q969W8 418 aa15.65■□□□□ 0.1
SREK1-216ENST00000612404 RHNO1Q9BSD3 238 aa15.65■□□□□ 0.1
SREK1-216ENST00000612404 EMC6Q9BV81 110 aa15.65■□□□□ 0.1
SREK1-216ENST00000612404 OR51V1Q9H2C8 321 aa15.65■□□□□ 0.1
SREK1-216ENST00000612404 ZNF696Q9H7X3 374 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms