RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ZNF544Q6NX49 715 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 MZT2BQ6NZ67 158 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 ZNF517Q6ZMY9 492 aaPredicted RBP10.82□□□□□ -0.68
USP6NL-206ENST00000609853 PRR23CQ6ZRP0 262 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 NR2C2APQ86WQ0 139 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 CDC20BQ86Y33 519 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 RFLNBQ8N5W9 214 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 SCAIQ8N9R8 606 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 IFI44Q8TCB0 444 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 THRSPQ92748 146 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 HGDQ93099 445 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 ZC3HAV1LQ96H79 300 aaKnown RBP10.82□□□□□ -0.68
USP6NL-206ENST00000609853 ADAD1Q96M93 576 aaKnown RBP10.82□□□□□ -0.68
USP6NL-206ENST00000609853 AGAP4Q96P64 663 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 GFM1Q96RP9 751 aaKnown RBP10.82□□□□□ -0.68
USP6NL-206ENST00000609853 TXNIPQ9H3M7 391 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 WDR76Q9H967 626 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 SDHAF3Q9NRP4 125 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 ACOXLQ9NUZ1 547 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 MRPL39Q9NYK5 338 aaKnown RBP10.82□□□□□ -0.68
USP6NL-206ENST00000609853 TEKT2Q9UIF3 430 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 RASD1Q9Y272 281 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 PCNX3Q9H6A9 2034 aa10.82□□□□□ -0.68
USP6NL-206ENST00000609853 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 IGHV3-20A0A0C4DH32 117 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 A0A0G2JK05 382 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 TRBV11-1A0A0K0K1C0 115 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 TMEM72A0PK05 275 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 NPIPB13A6NJU9 1138 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 CENPBD1B2RD01 187 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 NPIPB4C9JG80 1138 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 ETV2O00321 342 aaPredicted RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 ADAM10O14672 748 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 ZNF208O43345 1280 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 KRT8P05787 483 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 PRKAR1AP10644 381 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 PRKCAP17252 672 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 ELK1P19419 428 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 MAPK3P27361 379 aaPredicted RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 EIF2B2P49770 351 aaKnown RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 OR2B6P58173 313 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 RPS11P62280 158 aaKnown RBP eCLIP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 DAB2P98082 770 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 HSD17B12Q53GQ0 312 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 BAIAP2L2Q6UXY1 529 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 LSRQ86X29 649 aaPredicted RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 UBQLNLQ8IYU4 475 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 OR6V1Q8N148 313 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 DEFB123Q8N688 67 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 ZNF511Q8NB15 262 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 ZNF248Q8NDW4 579 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 NLGN4YQ8NFZ3 816 aaPredicted RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 SPSB2Q99619 263 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 KCNJ15Q99712 375 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 KLHDC3Q9BQ90 382 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 WDR77Q9BQA1 342 aaPredicted RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 CRB3Q9BUF7 120 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 MRI1Q9BV20 369 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 SRA1Q9HD15 236 aaKnown RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 RYDENQ9NUL5 291 aaKnown RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 VSX1Q9NZR4 365 aaPredicted RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 LAMP5Q9UJQ1 280 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 IGLV3-32A0A0A0MS00 114 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 PRSS37A4D1T9 235 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 A6NIZ1 184 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 MEN1O00255 615 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 PLPP3O14495 311 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 DVL2O14641 736 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 ARHGEF9O43307 516 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 TRAPPC2P0DI81 140 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 TRAPPC2BP0DI82 140 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 NR4A2P43354 598 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 RAP1BP61224 184 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 RAP1AP62834 184 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 SIGLEC14Q08ET2 396 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 DBPQ10586 325 aaPredicted RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 ZP4Q12836 540 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 SF3A2Q15428 464 aaKnown RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 PHF19Q5T6S3 580 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 FAM27D1Q5T7N8 215 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 FAM205BPQ63HN1 556 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 MRPL14Q6P1L8 145 aaKnown RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 RDH10Q8IZV5 341 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 GHDCQ8N2G8 530 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 ZBTB8BQ8NAP8 495 aaPredicted RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 MFSD8Q8NHS3 518 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 MAFAQ8NHW3 353 aaPredicted RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 ZNF519Q8TB69 540 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 SLC22A8Q8TCC7 542 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 ASB17Q8WXJ9 295 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 SLC25A36Q96CQ1 311 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 INTS14Q96SY0 518 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 C11orf54Q9H0W9 315 aaPredicted RBP10.81□□□□□ -0.68
USP6NL-206ENST00000609853 EXTL2Q9UBQ6 330 aa10.81□□□□□ -0.68
USP6NL-206ENST00000609853 ADAMTS9Q9P2N4 1935 aa10.8□□□□□ -0.68
USP6NL-206ENST00000609853 TMEM200CA6NKL6 621 aa10.8□□□□□ -0.68
USP6NL-206ENST00000609853 NTN3O00634 580 aaPredicted RBP10.8□□□□□ -0.68
USP6NL-206ENST00000609853 SYPP08247 313 aa10.8□□□□□ -0.68
USP6NL-206ENST00000609853 EPXP11678 715 aa10.8□□□□□ -0.68
USP6NL-206ENST00000609853 ALOX5APP20292 161 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms