RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 VAMP5O95183 116 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 HIST1H1CP16403 213 aaKnown RBP16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 ABOP16442 354 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 SDHAP31040 664 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 CDC42P60953 191 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 RPL27P61353 136 aaKnown RBP16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 DBPQ10586 325 aaPredicted RBP16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 SNAPC1Q16533 368 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 EEF1A1P5Q5VTE0 462 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 CREB3L2Q70SY1 520 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 CD163Q86VB7 1156 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 TCEANCQ8N8B7 351 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 OR4K13Q8NH42 304 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 FAM57AQ8TBR7 257 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 ZNF385AQ96PM9 386 aaKnown RBP16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 IL4I1Q96RQ9 567 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 EMC6Q9BV81 110 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 RASSF1Q9NS23 344 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 IMPAD1Q9NX62 359 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 ZNF226Q9NYT6 803 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 CLCF1Q9UBD9 225 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 ING1Q9UK53 422 aaPredicted RBP16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 RNF6Q9Y252 685 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 GPR52Q9Y2T5 361 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 PCDHGB5Q9Y5G0 923 aa16.98■□□□□ 0.31
UBE2E3-209ENST00000602710 SHANK1Q9Y566 2161 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 DENRO43583 198 aaKnown RBP16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 IDH3BO43837 385 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 BCL10O95999 233 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 IGHMP01871 453 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 HMGN1P05114 100 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 APEHP13798 732 aaKnown RBP16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 EDN3P14138 238 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 MYF6P23409 242 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 EFNB1P98172 346 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 RUNX1T1Q06455 604 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 POU4F3Q15319 338 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 ACSF3Q4G176 576 aaPredicted RBP16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 ARMC4Q5T2S8 1044 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 ENTHD1Q8IYW4 607 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 C8orf59Q8N0T1 100 aaPredicted RBP16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 ZIC4Q8N9L1 334 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 OR52E2Q8NGJ4 325 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 ZNF519Q8TB69 540 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 SLC38A2Q96QD8 506 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 APOL4Q9BPW4 351 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 SF3B5Q9BWJ5 86 aaKnown RBP16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 TEX12Q9BXU0 123 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 Q9H521 79 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 CMC2Q9NRP2 79 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 ZNF175Q9Y473 711 aa16.97■□□□□ 0.31
UBE2E3-209ENST00000602710 IMPA2O14732 288 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 TLX2O43763 284 aaPredicted RBP16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 TXNDC12O95881 172 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 NTF4P34130 210 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 ACVR1BP36896 505 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 CDKN2AP42771 156 aaKnown RBP16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 PCYT1AP49585 367 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 BIDP55957 195 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 CLDN17P56750 224 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 ISL1P61371 349 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 IL5RAQ01344 420 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 IL18R1Q13478 541 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 MESTQ5EB52 335 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 GPR139Q6DWJ6 353 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 RPTNQ6XPR3 784 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 PTCHD4Q6ZW05 846 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 ARIH2OSQ8N7S6 290 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 CYB561A3Q8NBI2 242 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 SDR9C7Q8NEX9 313 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 ASB10Q8WXI3 467 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 CLEC4AQ9UMR7 237 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 FLVCR1Q9Y5Y0 555 aa16.96■□□□□ 0.31
UBE2E3-209ENST00000602710 MED12LQ86YW9 2145 aa16.96■□□□□ 0.3
UBE2E3-209ENST00000602710 IGSF10Q6WRI0 2623 aa16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 H7C1C5 153 aa16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 DAP3P51398 398 aaKnown RBP16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 SLC16A1P53985 500 aa16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 LCN6P62502 163 aa16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 KRR1Q13601 381 aaKnown RBP16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 RTL6Q6ICC9 239 aa16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 C3P1Q6ZMU1 363 aa16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 P4HA3Q7Z4N8 544 aa16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 BCDIN3DQ7Z5W3 292 aaKnown RBP16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 DEPDC4Q8N2C3 294 aa16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 SETD9Q8NE22 299 aa16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 PLEKHA8Q96JA3 519 aa16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 NMNAT3Q96T66 252 aa16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 UBAP1Q9NZ09 502 aa16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 ZNF835Q9Y2P0 537 aa16.95■□□□□ 0.3
UBE2E3-209ENST00000602710 SLC35F4A4IF30 521 aa16.94■□□□□ 0.3
UBE2E3-209ENST00000602710 NPIPB13A6NJU9 1138 aa16.94■□□□□ 0.3
UBE2E3-209ENST00000602710 FAM183AA6NL82 134 aa16.94■□□□□ 0.3
UBE2E3-209ENST00000602710 RIIAD1A6NNX1 92 aa16.94■□□□□ 0.3
UBE2E3-209ENST00000602710 NPIPB4C9JG80 1138 aa16.94■□□□□ 0.3
UBE2E3-209ENST00000602710 ARHGEF9O43307 516 aa16.94■□□□□ 0.3
UBE2E3-209ENST00000602710 SLC19A2O60779 497 aa16.94■□□□□ 0.3
UBE2E3-209ENST00000602710 GABRB1P18505 474 aa16.94■□□□□ 0.3
UBE2E3-209ENST00000602710 CD47Q08722 323 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms