RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 MAKP20794 623 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 HLA-DMAP28067 261 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 SUMO3P55854 103 aaPredicted RBP10.59□□□□□ -0.71
VRK3-223ENST00000601341 PYDC2Q56P42 97 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 ATP1A1-AS1Q5TC04 95 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 ABHD17BQ5VST6 288 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 HACD4Q5VWC8 232 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 SLC22A10Q63ZE4 541 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 HBMQ6B0K9 141 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 ARHGAP11AQ6P4F7 1023 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 LINC00114Q6XXX2 140 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 WDR88Q6ZMY6 472 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 TMEM91Q6ZNR0 172 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 MEX3DQ86XN8 651 aaKnown RBP10.59□□□□□ -0.71
VRK3-223ENST00000601341 MS4A15Q8N5U1 240 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 ZNF563Q8TA94 476 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 PAQR8Q8TEZ7 354 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 KISS1RQ969F8 398 aaPredicted RBP10.59□□□□□ -0.71
VRK3-223ENST00000601341 KCNJ15Q99712 375 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 ALG8Q9BVK2 526 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 DPH1Q9BZG8 443 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 NEK6Q9HC98 313 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 TIGARQ9NQ88 270 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 RBFOX1Q9NWB1 397 aaKnown RBP10.59□□□□□ -0.71
VRK3-223ENST00000601341 ABI3Q9P2A4 366 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 WASF3Q9UPY6 502 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 NOX1Q9Y5S8 564 aa10.59□□□□□ -0.71
VRK3-223ENST00000601341 PIEZO1Q92508 2521 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 DAPL1A0PJW8 107 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 FAM172BPA6NC97 362 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 ZNF891A8MT65 544 aaPredicted RBP10.58□□□□□ -0.72
VRK3-223ENST00000601341 APOL3O95236 402 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 PRKAR1AP10644 381 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 HK1P19367 917 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 SLC2A5P22732 501 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 MSX1P28360 303 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 SLC6A6P31641 620 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 CYB561P49447 251 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 SOX8P57073 446 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.58□□□□□ -0.72
VRK3-223ENST00000601341 COL28A1Q2UY09 1125 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 RSBN1Q5VWQ0 802 aaPredicted RBP10.58□□□□□ -0.72
VRK3-223ENST00000601341 BICRALQ6AI39 1079 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 PLBD1Q6P4A8 553 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 PAMR1Q6UXH9 720 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 LRRC28Q86X40 367 aaPredicted RBP10.58□□□□□ -0.72
VRK3-223ENST00000601341 SYT14Q8NB59 555 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 C19orf18Q8NEA5 215 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 BBS1Q8NFJ9 593 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 KCNE4Q8WWG9 221 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 TEAD3Q99594 435 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 TIMP4Q99727 224 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 TTYH2Q9BSA4 534 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 PPP4R1LQ9P1A2 415 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 MSRB2Q9Y3D2 182 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 WIF1Q9Y5W5 379 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 PCSK5Q92824 1860 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 SPTBN2O15020 2390 aa10.58□□□□□ -0.72
VRK3-223ENST00000601341 IGLV3-32A0A0A0MS00 114 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 C2orf72A6NCS6 295 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 ARGFXA6NJG6 315 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 C17orf51A8MQB3 221 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 GMFGO60234 142 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 SC5DO75845 299 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 SLC2A10O95528 541 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 SBK2P0C263 348 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 PNMTP11086 282 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 SLC2A2P11168 524 aaPredicted RBP10.57□□□□□ -0.72
VRK3-223ENST00000601341 PTGDSP41222 190 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 TGM4P49221 684 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 SRSF6Q13247 344 aaKnown RBP10.57□□□□□ -0.72
VRK3-223ENST00000601341 ZNF468Q5VIY5 522 aaPredicted RBP10.57□□□□□ -0.72
VRK3-223ENST00000601341 TRIQKQ629K1 86 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 TIGD3Q6B0B8 471 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 OR5M10Q6IEU7 315 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 CNIH2Q6PI25 160 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 SHFQ7M4L6 423 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 KLBQ86Z14 1044 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 BEST3Q8N1M1 668 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 Q8N402 240 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 GALNT16Q8N428 558 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 POMGNT2Q8NAT1 580 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 SLC37A3Q8NCC5 494 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 ZNF248Q8NDW4 579 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 OR51G2Q8NGK0 314 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 GPR119Q8TDV5 335 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 PTP4A1Q93096 173 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 C3orf49Q96BT1 292 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 MRPL48Q96GC5 212 aaKnown RBP10.57□□□□□ -0.72
VRK3-223ENST00000601341 FRMD6Q96NE9 622 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 TMEM43Q9BTV4 400 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 TMED9Q9BVK6 235 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 HDHD5Q9BXW7 423 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 ANGPTL4Q9BY76 406 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 RNF121Q9H920 327 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 SH2D2AQ9NP31 389 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 C20orf141Q9NUB4 165 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 RABL2AQ9UBK7 228 aaPredicted RBP10.57□□□□□ -0.72
VRK3-223ENST00000601341 RABL2BQ9UNT1 228 aa10.57□□□□□ -0.72
VRK3-223ENST00000601341 A0A087WUJ7 227 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms