RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 HPRP00739 348 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 CECR9P0C854 216 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 CBLP22681 906 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 SNRPD2P62316 118 aaKnown RBP13.74□□□□□ -0.21
VRK3-221ENST00000600284 CYLC2Q14093 348 aaPredicted RBP13.74□□□□□ -0.21
VRK3-221ENST00000600284 SELPLGQ14242 412 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 ZNF627Q7L945 461 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 SNX32Q86XE0 403 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 NUP37Q8NFH4 326 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 GPR32P1Q8NGA4 272 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 OR6T1Q8NGN1 323 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 PROX1Q92786 737 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 FBXO17Q96EF6 278 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 MOGAT1Q96PD6 335 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 TNFRSF13CQ96RJ3 184 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 SH3GL1Q99961 368 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 B3GAT2Q9NPZ5 323 aa13.74□□□□□ -0.21
VRK3-221ENST00000600284 SLC35F4A4IF30 521 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 M0R3H8 397 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 PLPP3O14495 311 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 NPPAP01160 153 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 VIMP08670 466 aaKnown RBP13.73□□□□□ -0.21
VRK3-221ENST00000600284 HLA-DOBP13765 273 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 PCGF2P35227 344 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 GZMMP51124 257 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 TUBA1BP68363 451 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 TUBA4AP68366 448 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 POU3F1Q03052 451 aaPredicted RBP13.73□□□□□ -0.21
VRK3-221ENST00000600284 EFNB3Q15768 340 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 ENTPD8Q5MY95 495 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 TUBA1AQ71U36 451 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 CCDC80Q76M96 950 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 C10orf53Q8N6V4 93 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 ZNF525Q8N782 197 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 OR5J2Q8NH18 312 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 OR10A6Q8NH74 314 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 C10orf105Q8TEF2 133 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 HTRA1Q92743 480 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 ZNF837Q96EG3 531 aaPredicted RBP13.73□□□□□ -0.21
VRK3-221ENST00000600284 MPP4Q96JB8 637 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 PCDHAC1Q9H158 963 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 DENND2DQ9H6A0 471 aaPredicted RBP13.73□□□□□ -0.21
VRK3-221ENST00000600284 ZNF442Q9H7R0 627 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 USP22Q9UPT9 525 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 FKBP7Q9Y680 259 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 JMJD1CQ15652 2540 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 CR1P17927 2039 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 ABCA1O95477 2261 aa13.73□□□□□ -0.21
VRK3-221ENST00000600284 TRAPPC13A5PLN9 417 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 ZNF726A6NNF4 738 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 M0R3G1 203 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 NDUFS8O00217 210 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 OPN1SWP03999 348 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 CD247P20963 164 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 CALCRP30988 508 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 VLDLRP98155 873 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 ZP4Q12836 540 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 NPTX1Q15818 432 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 ADIPOQQ15848 244 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 VMACQ2NL98 169 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 TMEM249Q2WGJ8 235 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 TRMT5Q32P41 509 aaKnown RBP13.72□□□□□ -0.21
VRK3-221ENST00000600284 COQ5Q5HYK3 327 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 NANOGP8Q6NSW7 305 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 TTC33Q6PID6 262 aaPredicted RBP13.72□□□□□ -0.21
VRK3-221ENST00000600284 SLC26A7Q8TE54 656 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 ADAMTS16Q8TE57 1224 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 TXNDC15Q96J42 360 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 EMC6Q9BV81 110 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 SLC19A3Q9BZV2 496 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 PLK3Q9H4B4 646 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 NANOGQ9H9S0 305 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 MYOZ1Q9NP98 299 aaPredicted RBP13.72□□□□□ -0.21
VRK3-221ENST00000600284 YAE1D1Q9NRH1 226 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 MED29Q9NX70 200 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 B3GNT2Q9NY97 397 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 ADAM21Q9UKJ8 722 aa13.72□□□□□ -0.21
VRK3-221ENST00000600284 CPSF4LA6NMK7 179 aaKnown RBP13.71□□□□□ -0.21
VRK3-221ENST00000600284 A8MV72 311 aaPredicted RBP13.71□□□□□ -0.21
VRK3-221ENST00000600284 KIAA1324LA8MWY0 1029 aaPredicted RBP13.71□□□□□ -0.21
VRK3-221ENST00000600284 FBP2O00757 339 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 GPRIN2O60269 458 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 SASH3O75995 380 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 OR4A8P0C604 315 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 ADORA3P0DMS8 318 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 TROVE2P10155 538 aaKnown RBP eCLIP13.71□□□□□ -0.21
VRK3-221ENST00000600284 AHCYP23526 432 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 PPOXP50336 477 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 PDLIM4P50479 330 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 HGFACQ04756 655 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 ZNF74Q16587 644 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 PHYHD1Q5SRE7 291 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 CARD17Q5XLA6 110 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 HIPK1Q86Z02 1210 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 OR8J3Q8NGG0 315 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 NANOS1Q8WY41 292 aaKnown RBP13.71□□□□□ -0.21
VRK3-221ENST00000600284 TAMM41Q96BW9 452 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 ZNF426Q9BUY5 554 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 TMEM120AQ9BXJ8 343 aa13.71□□□□□ -0.21
VRK3-221ENST00000600284 POFUT2Q9Y2G5 429 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms