RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 NCK1P16333 377 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 PAX7P23759 505 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 EFNA4P52798 201 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 RGS8P57771 180 aaPredicted RBP16.34■□□□□ 0.21
PNKP-213ENST00000599543 MXRA7P84157 204 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 LGALS3BPQ08380 585 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 TMEM249Q2WGJ8 235 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 HMBOX1Q6NT76 420 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 CXXC5Q7LFL8 322 aaKnown RBP16.34■□□□□ 0.21
PNKP-213ENST00000599543 ARPINQ7Z6K5 226 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 PATL1Q86TB9 770 aaKnown RBP16.34■□□□□ 0.21
PNKP-213ENST00000599543 EPHX4Q8IUS5 362 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 FAM156AQ8NDB6 213 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 SLC38A2Q96QD8 506 aa16.34■□□□□ 0.21
PNKP-213ENST00000599543 A0A096LNT2 108 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 IGHV1-18A0A0C4DH31 117 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 FTCDNL1E5RQL4 147 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 TPST2O60704 377 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 CRYAAP02489 173 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 ZNF43P17038 809 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 EGR4Q05215 589 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 LOXL1Q08397 574 aaPredicted RBP16.33■□□□□ 0.2
PNKP-213ENST00000599543 NPTX1Q15818 432 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 C6orf52Q5T4I8 152 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 INTS11Q5TA45 600 aaKnown RBP16.33■□□□□ 0.2
PNKP-213ENST00000599543 FAM91A1Q658Y4 838 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 ERICH5Q6P6B1 374 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 CCDC80Q76M96 950 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 HIPK1Q86Z02 1210 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 SLC30A8Q8IWU4 369 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 KDM8Q8N371 416 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 RNF217Q8TC41 542 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 FBXO17Q96EF6 278 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 KTI12Q96EK9 354 aaPredicted RBP16.33■□□□□ 0.2
PNKP-213ENST00000599543 TNFRSF13CQ96RJ3 184 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 PTDSS2Q9BVG9 487 aa16.33■□□□□ 0.2
PNKP-213ENST00000599543 A0A1B0GWA3 101 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 GSTA4O15217 222 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 OR2T1O43869 369 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 UPK3AO75631 287 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 TCN1P20061 433 aaPredicted RBP16.32■□□□□ 0.2
PNKP-213ENST00000599543 MSX2P35548 267 aaPredicted RBP16.32■□□□□ 0.2
PNKP-213ENST00000599543 SH3BGRP55822 239 aaPredicted RBP16.32■□□□□ 0.2
PNKP-213ENST00000599543 CLDN17P56750 224 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 SNRPD2P62316 118 aaKnown RBP16.32■□□□□ 0.2
PNKP-213ENST00000599543 ROR2Q01974 943 aaKnown RBP16.32■□□□□ 0.2
PNKP-213ENST00000599543 CHRFAM7AQ494W8 412 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 C5orf46Q6UWT4 87 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 C6orf89Q6UWU4 347 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 LINGO2Q7L985 606 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 ARHGDIGQ99819 225 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 KCTD14Q9BQ13 255 aaPredicted RBP16.32■□□□□ 0.2
PNKP-213ENST00000599543 KATNB1Q9BVA0 655 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 LINC00470Q9BZP3 86 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 C12orf10Q9HB07 376 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 MOV10Q9HCE1 1003 aaKnown RBP16.32■□□□□ 0.2
PNKP-213ENST00000599543 EGFL7Q9UHF1 273 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 RCE1Q9Y256 329 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 FKBP7Q9Y680 259 aa16.32■□□□□ 0.2
PNKP-213ENST00000599543 A0A096LPE4 126 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 ARPC4-TTLL3A0A0A6YYG9 625 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 A0A1W2PPZ6 126 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 CXCR6O00574 342 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 SLC43A1O75387 559 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 IFNA2P01563 188 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 KDELR2P33947 212 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 NCALDP61601 193 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 TUBA1BP68363 451 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 TUBA4AP68366 448 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 VLDLRP98155 873 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 IL1RL1Q01638 556 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 C1DQ13901 141 aaKnown RBP16.31■□□□□ 0.2
PNKP-213ENST00000599543 KRT72Q14CN4 511 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 SWI5Q1ZZU3 235 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 CYBRD1Q53TN4 286 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 FAM69AQ5T7M9 428 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 ANKRD16Q6P6B7 361 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 RINLQ6ZS11 566 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 TUBA1AQ71U36 451 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 TSPYL5Q86VY4 417 aaPredicted RBP16.31■□□□□ 0.2
PNKP-213ENST00000599543 LSMEM1Q8N8F7 131 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 OR6T1Q8NGN1 323 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 MAGEE2Q8TD90 523 aaPredicted RBP16.31■□□□□ 0.2
PNKP-213ENST00000599543 C10orf105Q8TEF2 133 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 DNAJA4Q8WW22 397 aaPredicted RBP16.31■□□□□ 0.2
PNKP-213ENST00000599543 BCL2L2Q92843 193 aaPredicted RBP16.31■□□□□ 0.2
PNKP-213ENST00000599543 SLC38A4Q969I6 547 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 NSL1Q96IY1 281 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 TPD52L3Q96J77 140 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 OXGR1Q96P68 337 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 MCHR1Q99705 422 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 CA10Q9NS85 328 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 ABCD2Q9UBJ2 740 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 SEC14L4Q9UDX3 406 aa16.31■□□□□ 0.2
PNKP-213ENST00000599543 MALRD1Q5VYJ5 2156 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 CPSF4LA6NMK7 179 aaKnown RBP16.3■□□□□ 0.2
PNKP-213ENST00000599543 B2RBV5 119 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 M0R082 166 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 LY6HO94772 140 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 F12P00748 615 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms