RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ROR2Q01974 943 aaKnown RBP12.16□□□□□ -0.46
UPF1-205ENST00000598209 TRAM2Q15035 370 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 SPATS1Q496A3 300 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 NCMAPQ5T1S8 102 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 CARD17Q5XLA6 110 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 HMBOX1Q6NT76 420 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 ZNF704Q6ZNC4 412 aaPredicted RBP12.16□□□□□ -0.46
UPF1-205ENST00000598209 RINLQ6ZS11 566 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 TSEN54Q7Z6J9 526 aaKnown RBP12.16□□□□□ -0.46
UPF1-205ENST00000598209 CYP4Z1Q86W10 505 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 GPR137CQ8N3F9 429 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 C17orf78Q8N4C9 275 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 FAM86B1Q8N7N1 296 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 WDR31Q8NA23 367 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 PIK3C3Q8NEB9 887 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 ANKK1Q8NFD2 765 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 NSMCE2Q96MF7 247 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 TMEM204Q9BSN7 226 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 ESRP2Q9H6T0 727 aaKnown RBP12.16□□□□□ -0.46
UPF1-205ENST00000598209 SLC17A5Q9NRA2 495 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 CCM2LQ9NUG4 571 aaPredicted RBP12.16□□□□□ -0.46
UPF1-205ENST00000598209 NPAP1Q9NZP6 1156 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 V9GYQ6 96 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 CCDC168Q8NDH2 2452 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 DPRXA6NFQ7 191 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 ZNF726A6NNF4 738 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 BLOC1S5-TXNDC5H3BN57 136 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 ATE1O95260 518 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 CD3EP07766 207 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 IFI30P13284 250 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 IFNGR1P15260 489 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 BIDP55957 195 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 LSM11P83369 360 aaKnown RBP eCLIP12.15□□□□□ -0.46
UPF1-205ENST00000598209 BSPH1Q075Z2 132 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 CAMK2DQ13557 499 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 KEAP1Q14145 624 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 SLC35D2Q76EJ3 337 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 TRPM8Q7Z2W7 1104 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 WDFY1Q8IWB7 410 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 C20orf196Q8IYI0 205 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 OR1K1Q8NGR3 316 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 PYURFQ96I23 114 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 GPR35Q9HC97 309 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 NDUFAF4Q9P032 175 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 AMDHD2Q9Y303 409 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 FAM32AQ9Y421 112 aaKnown RBP12.15□□□□□ -0.46
UPF1-205ENST00000598209 RNF115Q9Y4L5 304 aa12.15□□□□□ -0.46
UPF1-205ENST00000598209 HTR3EA5X5Y0 456 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 RPL36A-HNRNPH2H7BZ11 118 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 hCG_2039718K7EN88 272 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 M0R3G1 203 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 CLOCKO15516 846 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 RHCEP18577 417 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 ZNF83P51522 516 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 SH3BGRP55822 239 aaPredicted RBP12.14□□□□□ -0.47
UPF1-205ENST00000598209 PRPS1P60891 318 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 VLDLRP98155 873 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 RPL18Q07020 188 aaKnown RBP12.14□□□□□ -0.47
UPF1-205ENST00000598209 ACKR1Q16570 336 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 CEACAM16Q2WEN9 425 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 TBRG1Q3YBR2 411 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 HIKESHIQ53FT3 197 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 PHYHD1Q5SRE7 291 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 KLHL24Q6TFL4 600 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 ZNF730Q6ZMV8 503 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 NRMQ8IXM6 262 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 ARHGAP24Q8N264 748 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 LIPHQ8WWY8 451 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 ACOT11Q8WXI4 607 aaPredicted RBP12.14□□□□□ -0.47
UPF1-205ENST00000598209 BCL2L2Q92843 193 aaPredicted RBP12.14□□□□□ -0.47
UPF1-205ENST00000598209 BPIFA2Q96DR5 249 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 BOD1Q96IK1 185 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 C7orf34Q96L11 122 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 LRR1Q96L50 414 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 C1QTNF6Q9BXI9 259 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 ANKRD19PQ9H560 264 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 NMNAT1Q9HAN9 279 aaPredicted RBP12.14□□□□□ -0.47
UPF1-205ENST00000598209 CRLF2Q9HC73 371 aa12.14□□□□□ -0.47
UPF1-205ENST00000598209 A0A087WUU8 490 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 M0R1B8 84 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 DIRAS1O95057 198 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 WNT11O96014 354 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 SEMG1P04279 462 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 F13BP05160 661 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 H1F0P07305 194 aaKnown RBP12.13□□□□□ -0.47
UPF1-205ENST00000598209 CD53P19397 219 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 AQP2P41181 271 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 ART1P52961 327 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 ARF1P84077 181 aaKnown RBP12.13□□□□□ -0.47
UPF1-205ENST00000598209 PRKCDQ05655 676 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 MELKQ14680 651 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 C1QTNF12Q5T7M4 302 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 ANKRD16Q6P6B7 361 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 TBPL2Q6SJ96 375 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 KLHL17Q6TDP4 642 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 C20orf204Q6ZNR8 217 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 MBOAT2Q6ZWT7 520 aa12.13□□□□□ -0.47
UPF1-205ENST00000598209 MEX3DQ86XN8 651 aaKnown RBP12.13□□□□□ -0.47
UPF1-205ENST00000598209 RNF113BQ8IZP6 322 aaKnown RBP12.13□□□□□ -0.47
UPF1-205ENST00000598209 OR6N1Q8NGY5 312 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms