RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 CDH2P19022 906 aaPredicted RBP14.67□□□□□ -0.06
SSBP4-204ENST00000597724 FUT1P19526 365 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 MSX2P35548 267 aaPredicted RBP14.67□□□□□ -0.06
SSBP4-204ENST00000597724 ART1P52961 327 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 MXRA7P84157 204 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 ROR2Q01974 943 aaKnown RBP14.67□□□□□ -0.06
SSBP4-204ENST00000597724 BSPH1Q075Z2 132 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 SPATS1Q496A3 300 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 C1QTNF12Q5T7M4 302 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 HIST3H2AQ7L7L0 130 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 WDFY1Q8IWB7 410 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 GPR137CQ8N3F9 429 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 RBM15BQ8NDT2 890 aaKnown RBP14.67□□□□□ -0.06
SSBP4-204ENST00000597724 LIPHQ8WWY8 451 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 HIST1H2ACQ93077 130 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 SGTBQ96EQ0 304 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 LRR1Q96L50 414 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 FOXC2Q99958 501 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 FNDC11Q9BVV2 318 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 UBTD1Q9HAC8 227 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 MAN2C1Q9NTJ4 1040 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 RHCGQ9UBD6 479 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 MAGEL2Q9UJ55 1249 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 SAMD4AQ9UPU9 718 aaKnown RBP14.67□□□□□ -0.06
SSBP4-204ENST00000597724 RNF115Q9Y4L5 304 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 ENPP4Q9Y6X5 453 aa14.67□□□□□ -0.06
SSBP4-204ENST00000597724 HTR3EA5X5Y0 456 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 B2RBV5 119 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 RNF13O43567 381 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 SERPINI2O75830 405 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 OR7A10O76100 309 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 CD3EP07766 207 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 TSPAN19P0C672 248 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 T-ENOLP0DO92 83 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 HIKESHIQ53FT3 197 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 HMBOX1Q6NT76 420 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 ADAM5Q6NVV9 412 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 NANOGNBQ7Z5D8 188 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 FAM86B1Q8N7N1 296 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 OR1K1Q8NGR3 316 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 LILRB1Q8NHL6 650 aaPredicted RBP14.66□□□□□ -0.06
SSBP4-204ENST00000597724 BCL2L2Q92843 193 aaPredicted RBP14.66□□□□□ -0.06
SSBP4-204ENST00000597724 C7orf34Q96L11 122 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 CXXC4Q9H2H0 198 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 GPR35Q9HC97 309 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 AMDHD2Q9Y303 409 aa14.66□□□□□ -0.06
SSBP4-204ENST00000597724 ZNF726A6NNF4 738 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 BLOC1S5-TXNDC5H3BN57 136 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 CLOCKO15516 846 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 PIP5K1CO60331 668 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 IFNGR1P15260 489 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 CALB2P22676 271 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 HOXC12P31275 282 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 ZNF83P51522 516 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 SH3BGRP55822 239 aaPredicted RBP14.65□□□□□ -0.06
SSBP4-204ENST00000597724 PRPS1P60891 318 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 LSM11P83369 360 aaKnown RBP eCLIP14.65□□□□□ -0.063e-6■■■■□ 19.8
SSBP4-204ENST00000597724 TRAM2Q15035 370 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 DEFB113Q30KQ7 82 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 TBRG1Q3YBR2 411 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 PHYHD1Q5SRE7 291 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 CARD17Q5XLA6 110 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 TMEM108Q6UXF1 575 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 SPNS3Q6ZMD2 512 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 C20orf204Q6ZNR8 217 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 SLC35D2Q76EJ3 337 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 CYP4Z1Q86W10 505 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 LURAP1LQ8IV03 231 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 C20orf196Q8IYI0 205 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 BPIFA2Q96DR5 249 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 ZNF837Q96EG3 531 aaPredicted RBP14.65□□□□□ -0.06
SSBP4-204ENST00000597724 ADAD1Q96M93 576 aaKnown RBP14.65□□□□□ -0.06
SSBP4-204ENST00000597724 ALPK1Q96QP1 1244 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 CRLF2Q9HC73 371 aa14.65□□□□□ -0.06
SSBP4-204ENST00000597724 PRRC2AP48634 2157 aaKnown RBP14.64□□□□□ -0.07
SSBP4-204ENST00000597724 A0A087WUU8 490 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 M0R3G1 203 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 HS3ST1O14792 307 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 ARPC2O15144 300 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 WNT11O96014 354 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 BIDP55957 195 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 ARF1P84077 181 aaKnown RBP14.64□□□□□ -0.07
SSBP4-204ENST00000597724 CAMK2DQ13557 499 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 CEACAM16Q2WEN9 425 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 ANKRD16Q6P6B7 361 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 KLHL17Q6TDP4 642 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 RINLQ6ZS11 566 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 RNF113BQ8IZP6 322 aaKnown RBP14.64□□□□□ -0.07
SSBP4-204ENST00000597724 ZNF611Q8N823 705 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 OR6X1Q8NH79 312 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 MAGEE2Q8TD90 523 aaPredicted RBP14.64□□□□□ -0.07
SSBP4-204ENST00000597724 BCAS4Q8TDM0 211 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 ACOT11Q8WXI4 607 aaPredicted RBP14.64□□□□□ -0.07
SSBP4-204ENST00000597724 AKAP1Q92667 903 aaKnown RBP eCLIP14.64□□□□□ -0.07
SSBP4-204ENST00000597724 PYURFQ96I23 114 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 NSMCE2Q96MF7 247 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 C1QTNF6Q9BXI9 259 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 NELFAQ9H3P2 528 aa14.64□□□□□ -0.07
SSBP4-204ENST00000597724 NMNAT1Q9HAN9 279 aaPredicted RBP14.64□□□□□ -0.07
SSBP4-204ENST00000597724 OBP2BQ9NPH6 170 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms