RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 DNAJA1P31689 397 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 GPR4P46093 362 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 RPL18Q07020 188 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 ABHD12BQ7Z5M8 362 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 ZNF295-AS1Q8N0V1 137 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 OR10A4Q9H209 315 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 MMADHCQ9H3L0 296 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 MED29Q9NX70 200 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 TAS2R16Q9NYV7 291 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 SLC7A8Q9UHI5 535 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 TMCC3Q9ULS5 477 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 AURKCQ9UQB9 309 aa17.35■□□□□ 0.37
SHKBP1-214ENST00000597396 DHRS12A0PJE2 317 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 ZNF726A6NNF4 738 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 RAP2AP10114 183 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 SSTR2P30874 369 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 AQP2P41181 271 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 MAGEA2P43356 314 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 TLE4Q04727 773 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 C9orf135Q5VTT2 229 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 CARD17Q5XLA6 110 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 SLC35D2Q76EJ3 337 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 GPR137CQ8N3F9 429 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 ZNF433Q8N7K0 673 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 OR4K5Q8NGD3 323 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 S100PBPQ96BU1 408 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 C14orf79Q96F83 325 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 FAM46AQ96IP4 442 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 TXNDC15Q96J42 360 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 ALPK1Q96QP1 1244 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 EMC6Q9BV81 110 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 ZNF226Q9NYT6 803 aa17.34■□□□□ 0.37
SHKBP1-214ENST00000597396 A0A1W2PRG6 482 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 SLC35F4A4IF30 521 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 ZNF587BE7ETH6 402 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 ZNF432O94892 652 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 F13BP05160 661 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 IFNGR1P15260 489 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 SLC9A3P48764 834 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 BIDP55957 195 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 LGALS3BPQ08380 585 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 SEC23BQ15437 767 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 OAFQ86UD1 273 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 ADGRG5Q8IZF4 528 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 MOSPD2Q8NHP6 518 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 CANT1Q8WVQ1 401 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 ALKBH3Q96Q83 286 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 OR2M2Q96R28 347 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 USB1Q9BQ65 265 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 LINC00470Q9BZP3 86 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 INIPQ9NRY2 104 aa17.33■□□□□ 0.36
SHKBP1-214ENST00000597396 LRBAP50851 2863 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 TRAV27A0A087WT01 109 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 SH3PXD2BA1X283 911 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 MCIDASD6RGH6 385 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 CLOCKO15516 846 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 UPK3AO75631 287 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 RAD51DO75771 328 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 KRT36O76013 467 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 BCL10O95999 233 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 ITGA5P08648 1049 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 MPGP29372 298 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 FOXG1P55316 489 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 TGFBR3Q03167 851 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 CAMK2DQ13557 499 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 MELKQ14680 651 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 STK11Q15831 433 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 ANKDD1AQ495B1 522 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 FBXW10Q5XX13 1052 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 ALKBH2Q6NS38 261 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 HMBOX1Q6NT76 420 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 TMPRSS11FQ6ZWK6 438 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 OR13C2Q8NGS9 318 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 OR51A7Q8NH64 312 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 ADAD1Q96M93 576 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 FUZQ9BT04 418 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 HIF3AQ9Y2N7 669 aa17.32■□□□□ 0.36
SHKBP1-214ENST00000597396 A6NNC1 897 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 TNFRSF11BO00300 401 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 OR10H3O60404 316 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 CIB2O75838 187 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 HOXB6P17509 224 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 CDH2P19022 906 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 ERFP50548 548 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 LAPTM4AQ15012 233 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 DAZAP2Q15038 168 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 ALG10Q5BKT4 473 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 OR2T5Q6IEZ7 315 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 NHLRC1Q6VVB1 395 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 TMEM200AQ86VY9 491 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 WFDC8Q8IUA0 241 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 TMEM123Q8N131 208 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 OR6N1Q8NGY5 312 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 OR2T29Q8NH02 315 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 RSRC1Q96IZ7 334 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 TNFRSF13CQ96RJ3 184 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 NDEL1Q9GZM8 345 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 REEP1Q9H902 201 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 B3GAT2Q9NPZ5 323 aa17.31■□□□□ 0.36
SHKBP1-214ENST00000597396 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms