RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 POM121Q96HA1 1249 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 TXNDC15Q96J42 360 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 ALKBH3Q96Q83 286 aaPredicted RBP9.18□□□□□ -0.94
CCDC9-203ENST00000596938 SLC38A2Q96QD8 506 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 KATNB1Q9BVA0 655 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 POLR2J2Q9GZM3 115 aaKnown RBP9.18□□□□□ -0.94
CCDC9-203ENST00000596938 POLR2J3Q9H1A7 115 aaKnown RBP9.18□□□□□ -0.94
CCDC9-203ENST00000596938 CRLF2Q9HC73 371 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 GPR35Q9HC97 309 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 SLC7A7Q9UM01 511 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 SH3GLB1Q9Y371 365 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 CAPN7Q9Y6W3 813 aa9.18□□□□□ -0.94
CCDC9-203ENST00000596938 IGHV1-18A0A0C4DH31 117 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 SLC35F4A4IF30 521 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 ZNF726A6NNF4 738 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 LY6G6DO95868 133 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 CH25HO95992 272 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 IGF2P01344 180 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 IGKV3-15P01624 115 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 IGLV1-44P01699 117 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 IGHV4-39P01824 125 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 BMP4P12644 408 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 CBR1P16152 277 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 AHCYP23526 432 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 KDELR2P33947 212 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 IL1RL1Q01638 556 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 TNK1Q13470 666 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 ZNF74Q16587 644 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 CEACAM16Q2WEN9 425 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 ZNF627Q7L945 461 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 CARM1Q86X55 608 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 ZNF837Q96EG3 531 aaPredicted RBP9.17□□□□□ -0.94
CCDC9-203ENST00000596938 ADAD1Q96M93 576 aaKnown RBP9.17□□□□□ -0.94
CCDC9-203ENST00000596938 PRSS27Q9BQR3 290 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 EMC6Q9BV81 110 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 NELFAQ9H3P2 528 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 TAS2R5Q9NYW4 299 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 ARMCX1Q9P291 453 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 ZNF229Q9UJW7 825 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 MOKQ9UQ07 419 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 ATP23Q9Y6H3 246 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 ARID1AO14497 2285 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 DSCAMO60469 2012 aa9.17□□□□□ -0.94
CCDC9-203ENST00000596938 ZANQ9Y493 2812 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 A0A096LPE4 126 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 A0A1W2PPZ6 126 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 ELOVL7A1L3X0 281 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 ZNF99A8MXY4 864 aaPredicted RBP9.16□□□□□ -0.94
CCDC9-203ENST00000596938 FAM220BPB1ANY3 271 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 H7C417 338 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 M0R3G1 203 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 SMAD7O15105 426 aaKnown RBP9.16□□□□□ -0.94
CCDC9-203ENST00000596938 NDUFS7O75251 213 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 OR5F1O95221 314 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 OR6A2O95222 327 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 CRYAAP02489 173 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 HIST1H2ABP04908 130 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 ASAH2BP0C7U1 165 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 ADORA3P0DMS8 318 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 THRBP10828 461 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 PTNP21246 168 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 ARR3P36575 388 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 RBM34P42696 430 aaKnown RBP9.16□□□□□ -0.94
CCDC9-203ENST00000596938 SELENOWP63302 87 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 POU3F1Q03052 451 aaPredicted RBP9.16□□□□□ -0.94
CCDC9-203ENST00000596938 CHRNB3Q05901 458 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 RAB35Q15286 201 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 SWI5Q1ZZU3 235 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 PHYHD1Q5SRE7 291 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 HIST3H2AQ7L7L0 130 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 ARPINQ7Z6K5 226 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 SLC15A3Q8IY34 581 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 IL17RDQ8NFM7 739 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 OR2T12Q8NG77 320 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 OR6X1Q8NH79 312 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 HIST1H2ACQ93077 130 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 RCN3Q96D15 328 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 HS6ST2Q96MM7 605 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 HOPXQ9BPY8 73 aaPredicted RBP9.16□□□□□ -0.94
CCDC9-203ENST00000596938 CACNG6Q9BXT2 260 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 EFCAB1Q9HAE3 211 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 B3GAT2Q9NPZ5 323 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 MEPEQ9NQ76 525 aaPredicted RBP9.16□□□□□ -0.94
CCDC9-203ENST00000596938 NANSQ9NR45 359 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 MED29Q9NX70 200 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 B3GNT2Q9NY97 397 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 RIMS3Q9UJD0 308 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 GDF2Q9UK05 429 aaPredicted RBP9.16□□□□□ -0.94
CCDC9-203ENST00000596938 USP22Q9UPT9 525 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 USF3Q68DE3 2245 aa9.16□□□□□ -0.94
CCDC9-203ENST00000596938 CADP27708 2225 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 HTR3EA5X5Y0 456 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 ATP6V1G2-DDX39BF2Z307 99 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 MT-ND1P03886 318 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 CECR9P0C854 216 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 COX4I1P13073 169 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 IFNGR1P15260 489 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 ACVR1BP36896 505 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 DSCR9P59020 149 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 TAS2R41P59536 307 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms