RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 DNASE1P24855 282 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 FOXG1P55316 489 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 PRPS1P60891 318 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 ROR2Q01974 943 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 PRKCDQ05655 676 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 TRIM25Q14258 630 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 DNAL1Q4LDG9 190 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 NHLRC1Q6VVB1 395 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 MBOAT2Q6ZWT7 520 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 SLC35D2Q76EJ3 337 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 HDDC2Q7Z4H3 204 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 DHFR2Q86XF0 187 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 NRMQ8IXM6 262 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 C20orf196Q8IYI0 205 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 OR6N1Q8NGY5 312 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 TXNDC15Q96J42 360 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 C7orf34Q96L11 122 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 PIP5K1AQ99755 562 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 PLEKHF2Q9H8W4 249 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 OBP2BQ9NPH6 170 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 KRCC1Q9NPI7 259 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 SLC17A5Q9NRA2 495 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 MAN2C1Q9NTJ4 1040 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 C20orf141Q9NUB4 165 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 MED29Q9NX70 200 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 STX18Q9P2W9 335 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 V9GYQ6 96 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 MPDZO75970 2070 aa15.19■□□□□ 0.02
SHKBP1-212ENST00000596163 A0A1W2PRQ8 180 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 SIAH2O43255 324 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 UBOX5O94941 541 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 PRSS23O95084 383 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 BCL10O95999 233 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 FABP3P05413 133 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 CD3EP07766 207 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 SAGP10523 405 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 CDH2P19022 906 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 SLC9A3P48764 834 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 DGCR6Q14129 220 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 CARD17Q5XLA6 110 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 ANKRD16Q6P6B7 361 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 TMEM123Q8N131 208 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 OR52N5Q8NH56 324 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 OR6X1Q8NH79 312 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 ALKBH3Q96Q83 286 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 ZNF347Q96SE7 839 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 EMC6Q9BV81 110 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 GPR35Q9HC97 309 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 MOV10Q9HCE1 1003 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 INIPQ9NRY2 104 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 ST6GALNAC2Q9UJ37 374 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 TMEM5Q9Y2B1 443 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 SLC25A15Q9Y619 301 aa15.18■□□□□ 0.02
SHKBP1-212ENST00000596163 A0A087WUU8 490 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 EFCAB9A8MZ26 197 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 hCG_2039718K7EN88 272 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 M0R3G1 203 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 GYG2O15488 501 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 LOXP28300 417 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 CSNK1A1P48729 337 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 DAP3P51398 398 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 BIDP55957 195 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 UBE2NP61088 152 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 VLDLRP98155 873 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 RPL18Q07020 188 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 KEAP1Q14145 624 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 TAF11Q15544 211 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 FGD3Q5JSP0 725 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 NCMAPQ5T1S8 102 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 TMEM108Q6UXF1 575 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 ZNF704Q6ZNC4 412 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 TSEN54Q7Z6J9 526 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 CCDC36Q8IYA8 594 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 FAM86B1Q8N7N1 296 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 OR1K1Q8NGR3 316 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 MAGEE2Q8TD90 523 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 SLC25A44Q96H78 314 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 RADILQ96JH8 1075 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 LRGUKQ96M69 825 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 THTPAQ9BU02 230 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 NDEL1Q9GZM8 345 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 CRLF2Q9HC73 371 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 IL1RAPQ9NPH3 570 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 MGAT4BQ9UQ53 548 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 RNF115Q9Y4L5 304 aa15.17■□□□□ 0.02
SHKBP1-212ENST00000596163 FBN2P35556 2912 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 DCHS2Q6V1P9 2916 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 MCIDASD6RGH6 385 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 PIP5K1CO60331 668 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 RAF1P04049 648 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 SEMG1P04279 462 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 TSPAN19P0C672 248 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 PTAFRP25105 342 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 AQP2P41181 271 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 RASSF2P50749 326 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 LGALS3BPQ08380 585 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 CAMK2DQ13557 499 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 ACKR1Q16570 336 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 LCN8Q6JVE9 175 aa15.16■□□□□ 0.02
SHKBP1-212ENST00000596163 PAMR1Q6UXH9 720 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms