RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 BTLAQ7Z6A9 289 aa11.46□□□□□ -0.57
SCAF1-202ENST00000595242 CMIPQ8IY22 773 aa11.46□□□□□ -0.57
SCAF1-202ENST00000595242 GCNT2Q8N0V5 402 aa11.46□□□□□ -0.57
SCAF1-202ENST00000595242 PIGXQ8TBF5 258 aa11.46□□□□□ -0.57
SCAF1-202ENST00000595242 ZNF721Q8TF20 911 aa11.46□□□□□ -0.57
SCAF1-202ENST00000595242 RAB2BQ8WUD1 216 aa11.46□□□□□ -0.57
SCAF1-202ENST00000595242 MYDGFQ969H8 173 aa11.46□□□□□ -0.57
SCAF1-202ENST00000595242 ABTB1Q969K4 478 aaPredicted RBP11.46□□□□□ -0.57
SCAF1-202ENST00000595242 ZC3HAV1LQ96H79 300 aaKnown RBP11.46□□□□□ -0.57
SCAF1-202ENST00000595242 COG8Q96MW5 612 aa11.46□□□□□ -0.57
SCAF1-202ENST00000595242 RHNO1Q9BSD3 238 aa11.46□□□□□ -0.57
SCAF1-202ENST00000595242 Q9N2J8 555 aa11.46□□□□□ -0.57
SCAF1-202ENST00000595242 ACOT13Q9NPJ3 140 aa11.46□□□□□ -0.57
SCAF1-202ENST00000595242 COPS7AQ9UBW8 275 aa11.46□□□□□ -0.57
SCAF1-202ENST00000595242 PRODH2Q9UF12 536 aa11.46□□□□□ -0.57
SCAF1-202ENST00000595242 SPRY1O43609 319 aaPredicted RBP11.45□□□□□ -0.58
SCAF1-202ENST00000595242 TMCC2O75069 709 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 EFNB1P98172 346 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 FGFBP1Q14512 234 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 ZNF267Q14586 743 aaPredicted RBP11.45□□□□□ -0.58
SCAF1-202ENST00000595242 TOMM20Q15388 145 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 ETFDHQ16134 617 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 GPR107Q5VW38 600 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 ZNF613Q6PF04 617 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 FIGNL1Q6PIW4 674 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 PLXDC2Q6UX71 529 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 AHSA2Q719I0 299 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 ZAR1Q86SH2 424 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 ANKRD13BQ86YJ7 626 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 DND1Q8IYX4 353 aaKnown RBP11.45□□□□□ -0.58
SCAF1-202ENST00000595242 RNF113BQ8IZP6 322 aaKnown RBP11.45□□□□□ -0.58
SCAF1-202ENST00000595242 SLC15A4Q8N697 577 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 OR8J1Q8NGP2 316 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 NUBPLQ8TB37 319 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 DOK4Q8TEW6 326 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 RORBQ92753 470 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 GGHQ92820 318 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 MPP4Q96JB8 637 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 GNRHR2Q96P88 292 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 GPA33Q99795 319 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 PRSS27Q9BQR3 290 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 COPS4Q9BT78 406 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 G6PC3Q9BUM1 346 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 OR10A5Q9H207 317 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 UBQLN3Q9H347 655 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 CLN6Q9NWW5 311 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 ENPP5Q9UJA9 477 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 DTX4Q9Y2E6 619 aa11.45□□□□□ -0.58
SCAF1-202ENST00000595242 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 EFCAB10A6NFE3 127 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 CLDN24A6NM45 220 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 HRKO00198 91 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 MSTNO14793 375 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 NOL3O60936 208 aaKnown RBP11.44□□□□□ -0.58
SCAF1-202ENST00000595242 TNFSF13O75888 250 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 INMTO95050 263 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 GABARAPO95166 117 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 SOX14O95416 240 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 IGKV1D-16P01601 117 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 FBXO45P0C2W1 286 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 CT45A8P0DMV1 189 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 CT45A9P0DMV2 189 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 HTR2AP28223 471 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 LCN1P31025 176 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 IDUAP35475 653 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 UGT2B10P36537 528 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 CD79BP40259 229 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 PCYT1AP49585 367 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 ROR2Q01974 943 aaKnown RBP11.44□□□□□ -0.58
SCAF1-202ENST00000595242 CT45A2Q5DJT8 189 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 EEF1A1P5Q5VTE0 462 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 TMEM236Q5W0B7 351 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 CASP12Q6UXS9 341 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 ZNF730Q6ZMV8 503 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 SLC16A12Q6ZSM3 486 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 PTCHD4Q6ZW05 846 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 ZNF550Q7Z398 422 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 NKAIN4Q8IVV8 208 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 C9orf40Q8IXQ3 194 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 WNT2BQ93097 391 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 YIPF6Q96EC8 236 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 Q96MT0 163 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 CDCA4Q9BXL8 241 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 BEX2Q9BXY8 128 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 ANGPTL4Q9BY76 406 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 PLA2G12AQ9BZM1 189 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 CCDC90BQ9GZT6 254 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 KRCC1Q9NPI7 259 aaPredicted RBP11.44□□□□□ -0.58
SCAF1-202ENST00000595242 CTPS2Q9NRF8 586 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.44□□□□□ -0.58
SCAF1-202ENST00000595242 ERVK-19Q9WJR5 959 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 CFL2Q9Y281 166 aa11.44□□□□□ -0.58
SCAF1-202ENST00000595242 NPIPA5A0A0B4J1W7 369 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 ANKRD33BA6NCL7 494 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 NPIPA7E9PJI5 369 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 H3BN98 237 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 IGKV3-11P04433 115 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 NPIPA8P0DM63 369 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 THBS2P35442 1172 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 GIPRP48546 466 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms