RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 COA4Q9NYJ1 87 aa15.59■□□□□ 0.09
SHKBP1-205ENST00000594973 SHISA3A0PJX4 238 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 FCER2P06734 321 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 NGFRP08138 427 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 TBXA2RP21731 343 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 ARRB1P49407 418 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 ACSM1Q08AH1 577 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 SHBQ15464 509 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 ZNF141Q15928 474 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 FCRLBQ6BAA4 426 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 PLBD1Q6P4A8 553 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 THSD4Q6ZMP0 1018 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 LHFPL3Q86UP9 236 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 BRIX1Q8TDN6 353 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 IFT27Q9BW83 186 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 METTL17Q9H7H0 456 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 MED20Q9H944 212 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 HINT3Q9NQE9 182 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 FSCN3Q9NQT6 498 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 SPATA2Q9UM82 520 aa15.58■□□□□ 0.08
SHKBP1-205ENST00000594973 PLSCR5A0PG75 271 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 SOCS6O14544 535 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 LRRTM2O43300 516 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 CSTAP01040 98 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 SYPP08247 313 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 ADRB1P08588 477 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 NPR2P20594 1047 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 ATP6V1E1P36543 226 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 HBMQ6B0K9 141 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 LYPD4Q6UWN0 246 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 MED25Q71SY5 747 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 MS4A3Q96HJ5 214 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 LCORQ96JN0 433 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 TMPRSS13Q9BYE2 586 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 TRIM2Q9C040 744 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 H2AFY2Q9P0M6 372 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 PRODH2Q9UF12 536 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 NDRG3Q9UGV2 375 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 PURGQ9UJV8 347 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 CACNA1EQ15878 2313 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 NPIPB9F8W1W9 429 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 L7N2F9 121 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 LGALS8O00214 317 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 YKT6O15498 198 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 GIFP27352 417 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 CD79BP40259 229 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 MTNR1BP49286 362 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 TSC22D1Q15714 1073 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 KIRREL2Q6UWL6 708 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 C17orf107Q6ZR85 190 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 CXXC5Q7LFL8 322 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 NAXDQ8IW45 347 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 TMEM151BQ8IW70 566 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 D2HGDHQ8N465 521 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 TOMM5Q8N4H5 51 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 CCDC74AQ96AQ1 378 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 FN3KQ9H479 309 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 RPS6KB2Q9UBS0 482 aa15.57■□□□□ 0.08
SHKBP1-205ENST00000594973 ZC3H12DA2A288 527 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 SERINC4A6NH21 518 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 BHLHE40O14503 412 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 PRAF2O60831 178 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 RPL35P42766 123 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 EFNA3P52797 238 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 SLC37A1P57057 533 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 FGL1Q08830 312 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 PDSS1Q5T2R2 415 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 LYSMD4Q5XG99 296 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 TMPRSS11FQ6ZWK6 438 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 GAL3ST4Q96RP7 486 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 MED17Q9NVC6 651 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 ATXN7L1Q9ULK2 861 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 SIGLEC7Q9Y286 467 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 TMEM5Q9Y2B1 443 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 H7C2Y5 167 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 SULT1B1O43704 296 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 PLATP00750 562 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 LIMS3P0CW19 117 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 LIMS4P0CW20 117 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 SELENOPP49908 381 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 AKR1D1P51857 326 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 IDNKQ5T6J7 187 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 ZNF550Q7Z398 422 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 SLITRK4Q8IW52 837 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 ZSCAN1Q8NBB4 408 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 NXF5Q9H1B4 397 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 ZCCHC4Q9H5U6 513 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 FGF21Q9NSA1 209 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 SERTAD3Q9UJW9 196 aa15.56■□□□□ 0.08
SHKBP1-205ENST00000594973 D6RAR5 112 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 ZNF593O00488 134 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 TOXO94900 526 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 RCBTB2O95199 551 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 PDGFBP01127 241 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 CXCL2P19875 107 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 FBLP22087 321 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 FOXL2P58012 376 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 RPS7P62081 194 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 NSDHLQ15738 373 aa15.55■□□□□ 0.08
SHKBP1-205ENST00000594973 ARHGAP40Q5TG30 622 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms