RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 NANOGQ9H9S0 305 aa20.43■□□□□ 0.86
LSM4-204ENST00000594828 MRGBPQ9NV56 204 aa20.43■□□□□ 0.86
LSM4-204ENST00000594828 CSPG4Q6UVK1 2322 aa20.43■□□□□ 0.86
LSM4-204ENST00000594828 PLCE1Q9P212 2302 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 SLC35F4A4IF30 521 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 PLPP3O14495 311 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 MT-ATP6P00846 226 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 IGKV3-15P01624 115 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 IGLV1-44P01699 117 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 CD247P20963 164 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 AHCYP23526 432 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 GZMMP51124 257 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 EFNA4P52798 201 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 SWI5Q1ZZU3 235 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 MST1LQ2TV78 715 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 PHYHD1Q5SRE7 291 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 NHLRC1Q6VVB1 395 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 PXKQ7Z7A4 578 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 CCDC36Q8IYA8 594 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 OR4D11Q8NGI4 311 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 ADAMTS16Q8TE57 1224 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 RASSF5Q8WWW0 418 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 TAMM41Q96BW9 452 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 TXNDC15Q96J42 360 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 LRR1Q96L50 414 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 CA10Q9NS85 328 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 MED29Q9NX70 200 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 HIVEP2P31629 2446 aa20.42■□□□□ 0.86
LSM4-204ENST00000594828 ZNF726A6NNF4 738 aa20.41■□□□□ 0.86
LSM4-204ENST00000594828 ZNF99A8MXY4 864 aaPredicted RBP20.41■□□□□ 0.86
LSM4-204ENST00000594828 SERPINF1P36955 418 aa20.41■□□□□ 0.86
LSM4-204ENST00000594828 ARFIP2P53365 341 aa20.41■□□□□ 0.86
LSM4-204ENST00000594828 MMEL1Q495T6 779 aa20.41■□□□□ 0.86
LSM4-204ENST00000594828 TTC33Q6PID6 262 aaPredicted RBP20.41■□□□□ 0.86
LSM4-204ENST00000594828 ZNF525Q8N782 197 aa20.41■□□□□ 0.86
LSM4-204ENST00000594828 OR5J2Q8NH18 312 aa20.41■□□□□ 0.86
LSM4-204ENST00000594828 LRRC58Q96CX6 371 aa20.41■□□□□ 0.86
LSM4-204ENST00000594828 ECSITQ9BQ95 431 aa20.41■□□□□ 0.86
LSM4-204ENST00000594828 B3GAT2Q9NPZ5 323 aa20.41■□□□□ 0.86
LSM4-204ENST00000594828 FGFR1OP2Q9NVK5 253 aa20.41■□□□□ 0.86
LSM4-204ENST00000594828 ZANQ9Y493 2812 aa20.41■□□□□ 0.86
LSM4-204ENST00000594828 TRAPPC13A5PLN9 417 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 SERPINI2O75830 405 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 OR6A2O95222 327 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 THY1P04216 161 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 ADORA3P0DMS8 318 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 ARR3P36575 388 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 CAPZA2P47755 286 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 SF3A3Q12874 501 aaKnown RBP eCLIP20.4■□□□□ 0.86
LSM4-204ENST00000594828 KLF10Q13118 480 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 CAMK2DQ13557 499 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 RABL3Q5HYI8 236 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 WDR88Q6ZMY6 472 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 CCDC80Q76M96 950 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 PRIMA1Q86XR5 153 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 OR4F15Q8NGB8 312 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 FAM168AQ92567 244 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 SEC61A2Q9H9S3 476 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 SLC7A7Q9UM01 511 aa20.4■□□□□ 0.86
LSM4-204ENST00000594828 ALPK2Q86TB3 2170 aa20.39■□□□□ 0.86
LSM4-204ENST00000594828 CR1P17927 2039 aa20.39■□□□□ 0.86
LSM4-204ENST00000594828 CD5LO43866 347 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 SEC14L2O76054 403 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 LYPD3O95274 346 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 CH25HO95992 272 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 F12P00748 615 aaPredicted RBP20.39■□□□□ 0.85
LSM4-204ENST00000594828 NPPAP01160 153 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 CELA3BP08861 270 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 CALCRP30988 508 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 IDH3GP51553 393 aaPredicted RBP20.39■□□□□ 0.85
LSM4-204ENST00000594828 SNRPD2P62316 118 aaKnown RBP20.39■□□□□ 0.85
LSM4-204ENST00000594828 COQ5Q5HYK3 327 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 VHLLQ6RSH7 139 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 OR8J3Q8NGG0 315 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 OR6N1Q8NGY5 312 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 MPP4Q96JB8 637 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 PCDHAC1Q9H158 963 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 USP22Q9UPT9 525 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 POFUT2Q9Y2G5 429 aa20.39■□□□□ 0.85
LSM4-204ENST00000594828 ZNF503-AS2A6NEH8 195 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 B9A039 149 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 C11orf98E9PRG8 122 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 TLX2O43763 284 aaPredicted RBP20.38■□□□□ 0.85
LSM4-204ENST00000594828 CRLF1O75462 422 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 VIMP08670 466 aaKnown RBP20.38■□□□□ 0.85
LSM4-204ENST00000594828 OR4A8P0C604 315 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 SLC25A16P16260 332 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 CRYBA2P53672 197 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 NPRL3Q12980 569 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 ADIPOQQ15848 244 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 ZNF74Q16587 644 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 MDP1Q86V88 176 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 TSPYL5Q86VY4 417 aaPredicted RBP20.38■□□□□ 0.85
LSM4-204ENST00000594828 SNX32Q86XE0 403 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 CALHM3Q86XJ0 350 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 PROX1Q92786 737 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 SAR1AQ9NR31 198 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 NANSQ9NR45 359 aa20.38■□□□□ 0.85
LSM4-204ENST00000594828 BBIP1A8MTZ0 92 aa20.37■□□□□ 0.85
LSM4-204ENST00000594828 VSTM5A8MXK1 200 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms