RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 GTF3AQ92664 365 aaKnown RBP14.06□□□□□ -0.16
PNKP-204ENST00000594661 CTHRC1Q96CG8 243 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 MMABQ96EY8 250 aaPredicted RBP14.06□□□□□ -0.16
PNKP-204ENST00000594661 CD180Q99467 661 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 TCEAL7Q9BRU2 100 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 CACYBPQ9HB71 228 aaKnown RBP14.06□□□□□ -0.16
PNKP-204ENST00000594661 SEMA4GQ9NTN9 838 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 WDR45Q9Y484 360 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 ASXL3Q9C0F0 2248 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 CCDC163A0A0D9SF12 145 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 OR2M5A3KFT3 312 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 SLC35E2P0CK97 266 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 ATXN8OSP0DMR3 200 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 GLB1P16278 677 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 GSTM3P21266 225 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 MST1P26927 711 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 TRHRP34981 398 aaPredicted RBP14.06□□□□□ -0.16
PNKP-204ENST00000594661 PTGFRP43088 359 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 CCR6P51684 374 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 SEC61A1P61619 476 aaKnown RBP14.06□□□□□ -0.16
PNKP-204ENST00000594661 DUSP8Q13202 625 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 ARHGAP11BQ3KRB8 267 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 ENTPD8Q5MY95 495 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 PMS2CLQ68D20 193 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 SLC6A19Q695T7 634 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 ZNF660Q6AZW8 331 aaPredicted RBP14.06□□□□□ -0.16
PNKP-204ENST00000594661 TMEM88Q6PEY1 159 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 GSG1LQ6UXU4 331 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 RBMS3Q6XE24 437 aaKnown RBP14.06□□□□□ -0.16
PNKP-204ENST00000594661 SIAH3Q8IW03 269 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 NEIL3Q8TAT5 605 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 NR4A3Q92570 626 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 DIO2Q92813 273 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 CHRNA10Q9GZZ6 450 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 MTHFD2LQ9H903 347 aaPredicted RBP14.06□□□□□ -0.16
PNKP-204ENST00000594661 FSCN3Q9NQT6 498 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 ZNF443Q9Y2A4 671 aaPredicted RBP14.06□□□□□ -0.16
PNKP-204ENST00000594661 DMDP11532 3685 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 CABIN1Q9Y6J0 2220 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 CACNA1EQ15878 2313 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 CENPVL1A0A0U1RR11 272 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 FITM1A5D6W6 292 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 TLX2O43763 284 aaPredicted RBP14.05□□□□□ -0.16
PNKP-204ENST00000594661 OR10H2O60403 315 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 OR2A4O95047 310 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 EIF4EP06730 217 aaKnown RBP14.05□□□□□ -0.16
PNKP-204ENST00000594661 IFNGR2P38484 337 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 GIPRP48546 466 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 CAPZA1P52907 286 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 SKP1P63208 163 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 ST3GAL3Q11203 375 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 ECH1Q13011 328 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 SLC25A30Q5SVS4 291 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 Q6ZTK2 550 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 MARCH9Q86YJ5 346 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 PUSL1Q8N0Z8 303 aaKnown RBP14.05□□□□□ -0.16
PNKP-204ENST00000594661 SVBPQ8N300 66 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 TOMM5Q8N4H5 51 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 OR14A16Q8NHC5 309 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 C2CD4CQ8TF44 421 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 OR2A7Q96R45 310 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 ABHD1Q96SE0 405 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 SDF2Q99470 211 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 BARX1Q9HBU1 254 aaPredicted RBP14.05□□□□□ -0.16
PNKP-204ENST00000594661 PRMT8Q9NR22 394 aaPredicted RBP14.05□□□□□ -0.16
PNKP-204ENST00000594661 NTNG1Q9Y2I2 539 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 CLDN16Q9Y5I7 305 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 ARID1BQ8NFD5 2236 aaPredicted RBP14.05□□□□□ -0.16
PNKP-204ENST00000594661 TNRC6BQ9UPQ9 1833 aaKnown RBP14.05□□□□□ -0.16
PNKP-204ENST00000594661 DBX1A6NMT0 343 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 H3BMH7 237 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 UBE2CO00762 179 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 DUX1O43812 170 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 PRAMEF2O60811 474 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 FZD7O75084 574 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 NTN1O95631 604 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 CRYBA1P05813 215 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 NPR2P20594 1047 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 ARRB1P49407 418 aaPredicted RBP14.05□□□□□ -0.16
PNKP-204ENST00000594661 GAS1P54826 345 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 BTG2P78543 158 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 ZNF155Q12901 538 aaPredicted RBP14.05□□□□□ -0.16
PNKP-204ENST00000594661 ACSM5Q6NUN0 579 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 ZC3H14Q6PJT7 736 aaKnown RBP14.05□□□□□ -0.16
PNKP-204ENST00000594661 WDR5BQ86VZ2 330 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 CDRT4Q8N9R6 151 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 GNPDA2Q8TDQ7 276 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 MCHR1Q99705 422 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 POLDIP3Q9BY77 421 aaKnown RBP14.05□□□□□ -0.16
PNKP-204ENST00000594661 CHIAQ9BZP6 476 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 C20orf85Q9H1P6 137 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 EGLN3Q9H6Z9 239 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 FGF20Q9NP95 211 aaPredicted RBP14.05□□□□□ -0.16
PNKP-204ENST00000594661 FBXO34Q9NWN3 711 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 CNIH4Q9P003 139 aa14.05□□□□□ -0.16
PNKP-204ENST00000594661 ARGFXA6NJG6 315 aa14.04□□□□□ -0.16
PNKP-204ENST00000594661 HRKO00198 91 aa14.04□□□□□ -0.16
PNKP-204ENST00000594661 HIST1H2ABP04908 130 aa14.04□□□□□ -0.16
PNKP-204ENST00000594661 CPN1P15169 458 aa14.04□□□□□ -0.16
PNKP-204ENST00000594661 PAICSP22234 425 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms