RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 HIF3AQ9Y2N7 669 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 EXOSC1Q9Y3B2 195 aaKnown RBP11.91□□□□□ -0.5
VRK3-205ENST00000593919 A0A087WZY1 265 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 PINLYPA6NC86 204 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 FAM183AA6NL82 134 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 ZNF208O43345 1280 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 AHSA1O95433 338 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 HNRNPCP07910 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
VRK3-205ENST00000593919 PEPDP12955 493 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 CPEP16870 476 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 CNR1P21554 472 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 ADH6P28332 368 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 EIF1P41567 113 aaKnown RBP11.9□□□□□ -0.5
VRK3-205ENST00000593919 CCL11P51671 97 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 PRPS1P60891 318 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 FOXK2Q01167 660 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 DEFB109BQ30KR1 87 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 SLC35F1Q5T1Q4 408 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 AADACL4Q5VUY2 407 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 SLC6A19Q695T7 634 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 NANOGNBQ7Z5D8 188 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 LHFPL3Q86UP9 236 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 SLC43A2Q8N370 569 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 OR4F15Q8NGB8 312 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 MOSPD2Q8NHP6 518 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 SLC39A7Q92504 469 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 RFKQ969G6 155 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 TMEM203Q969S6 136 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 DDIT4LQ96D03 193 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 UBL7Q96S82 380 aaPredicted RBP11.9□□□□□ -0.5
VRK3-205ENST00000593919 NUAK2Q9H093 628 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 TMEM185BQ9H7F4 350 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 DKKL1Q9UK85 242 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 PEX16Q9Y5Y5 336 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 ATMQ13315 3056 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 FUOMA2VDF0 154 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 OR5H15A6NDH6 313 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 TAF4O00268 1085 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 LRRTM2O43300 516 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 OR2T1O43869 369 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 ZIC3O60481 467 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 MT-ATP6P00846 226 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 HMGN1P05114 100 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 RFPL3SP0C7P2 107 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 HK1P19367 917 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 UQCRC1P31930 480 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 RPL4P36578 427 aaKnown RBP11.9□□□□□ -0.5
VRK3-205ENST00000593919 RPS19P39019 145 aaKnown RBP11.9□□□□□ -0.5
VRK3-205ENST00000593919 AQP2P41181 271 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 BCAP31P51572 246 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 MAP2K6P52564 334 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 FOXO1Q12778 655 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 MFAP5Q13361 173 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 OXA1LQ15070 435 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 MAMDC2Q7Z304 686 aaPredicted RBP11.9□□□□□ -0.5
VRK3-205ENST00000593919 CPOQ8IVL8 374 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 GTPBP8Q8N3Z3 284 aaPredicted RBP11.9□□□□□ -0.5
VRK3-205ENST00000593919 FDCSPQ8NFU4 85 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 PRR7Q8TB68 274 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 TM9SF4Q92544 642 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 HINT3Q9NQE9 182 aaKnown RBP11.9□□□□□ -0.5
VRK3-205ENST00000593919 KLHL1Q9NR64 748 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 SERINC1Q9NRX5 453 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 SNTG1Q9NSN8 517 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 H2AFY2Q9P0M6 372 aaPredicted RBP11.9□□□□□ -0.5
VRK3-205ENST00000593919 MSRB2Q9Y3D2 182 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 ADAM18Q9Y3Q7 739 aa11.9□□□□□ -0.5
VRK3-205ENST00000593919 IGF2RP11717 2491 aa11.9□□□□□ -0.51
VRK3-205ENST00000593919 TNRC6AQ8NDV7 1962 aaKnown RBP11.89□□□□□ -0.51
VRK3-205ENST00000593919 TMEM129A0AVI4 362 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 FTCDNL1E5RQL4 147 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 ZNF670-ZNF695F2Z2N8 137 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 TBX1O43435 398 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 UPK1BO75841 260 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 HIST1H2ABP04908 130 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 LIMS3P0CW19 117 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 LIMS4P0CW20 117 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 TFPIP10646 304 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 NOS3P29474 1203 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 MXD1Q05195 221 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 RPL18Q07020 188 aaKnown RBP11.89□□□□□ -0.51
VRK3-205ENST00000593919 C19orf57Q0VDD7 668 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 SELENBP1Q13228 472 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 TOMM20Q15388 145 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 TMEM44Q2T9K0 475 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.89□□□□□ -0.51
VRK3-205ENST00000593919 RAET1LQ5VY80 246 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 GDPGP1Q6ZNW5 385 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 HIST3H2AQ7L7L0 130 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 CXXC5Q7LFL8 322 aaKnown RBP11.89□□□□□ -0.51
VRK3-205ENST00000593919 PARP16Q8N5Y8 322 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 ZFP41Q8N8Y5 198 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 MDS2Q8NDY4 140 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 FAM83FQ8NEG4 500 aaPredicted RBP11.89□□□□□ -0.51
VRK3-205ENST00000593919 OR2M7Q8NG81 312 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 HIST1H2ACQ93077 130 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 ERMAPQ96PL5 475 aaPredicted RBP11.89□□□□□ -0.51
VRK3-205ENST00000593919 GPX7Q96SL4 187 aaPredicted RBP11.89□□□□□ -0.51
VRK3-205ENST00000593919 FAM173AQ9BQD7 235 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 MED20Q9H944 212 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms