RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 RNF115Q9Y4L5 304 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 V9GYQ6 96 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 AKAP9Q99996 3911 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 SLC35F4A4IF30 521 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 J3KTA2 159 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 HPRP00739 348 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 SAGP10523 405 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-227ENST00000591849 IFI30P13284 250 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 HLA-DOBP13765 273 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 IFNGR1P15260 489 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 CALB2P22676 271 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 PTAFRP25105 342 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 MSX2P35548 267 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-227ENST00000591849 CAPZA2P47755 286 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 CSNK1A1P48729 337 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 UGT2B15P54855 530 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 SH3BGRP55822 239 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-227ENST00000591849 BIDP55957 195 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 ARF1P84077 181 aaKnown RBP8.85□□□□□ -0.99
BRCA1-227ENST00000591849 BSPH1Q075Z2 132 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 ZP4Q12836 540 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 CEACAM16Q2WEN9 425 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 SPATS1Q496A3 300 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 C20orf204Q6ZNR8 217 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 SLC35D2Q76EJ3 337 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 TSPYL5Q86VY4 417 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-227ENST00000591849 FITM2Q8N6M3 262 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 FAM156AQ8NDB6 213 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 AKAP1Q92667 903 aaKnown RBP eCLIP8.85□□□□□ -0.99
BRCA1-227ENST00000591849 PIGTQ969N2 578 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 TXNDC15Q96J42 360 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 ALKBH3Q96Q83 286 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-227ENST00000591849 OR2M2Q96R28 347 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 CCL19Q99731 98 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 ULBP2Q9BZM5 246 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 NDEL1Q9GZM8 345 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 GORASP2Q9H8Y8 452 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 GPR35Q9HC97 309 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 DCAF13Q9NV06 445 aaKnown RBP8.85□□□□□ -0.99
BRCA1-227ENST00000591849 A4GNTQ9UNA3 340 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 MGAT4BQ9UQ53 548 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 SNX13Q9Y5W8 968 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 SLC25A15Q9Y619 301 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 ENPP4Q9Y6X5 453 aa8.85□□□□□ -0.99
BRCA1-227ENST00000591849 ABCA4P78363 2273 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 ITPR3Q14573 2671 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 A0A096LPE4 126 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 A0A1W2PPZ6 126 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 HTR3EA5X5Y0 456 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 DPRXA6NFQ7 191 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 EFCAB9A8MZ26 197 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 PDLIM1O00151 329 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 HS3ST1O14792 307 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 TRAF3IP2O43734 574 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-227ENST00000591849 SMPD2O60906 423 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 FZD7O75084 574 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 ATE1O95260 518 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 PLAUP00749 431 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 H1F0P07305 194 aaKnown RBP8.84□□□□□ -0.99
BRCA1-227ENST00000591849 HSD17B1P14061 328 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 ITGA2P17301 1181 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 PAX7P23759 505 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 AQP2P41181 271 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 SMIM11AP58511 58 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 TAF11Q15544 211 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 DEFB113Q30KQ7 82 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 TBRG1Q3YBR2 411 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 HIKESHIQ53FT3 197 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 FGD3Q5JSP0 725 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 C1QTNF12Q5T7M4 302 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 ADAM5Q6NVV9 412 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 ANKRD16Q6P6B7 361 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 SLC22A25Q6T423 547 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 HDDC2Q7Z4H3 204 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 C20orf196Q8IYI0 205 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 RNF113BQ8IZP6 322 aaKnown RBP8.84□□□□□ -0.99
BRCA1-227ENST00000591849 OFCC1Q8IZS5 231 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 OR1K1Q8NGR3 316 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 TMEM171Q8WVE6 324 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 ZNF566Q969W8 418 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 BPIFA2Q96DR5 249 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 PYURFQ96I23 114 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 RADILQ96JH8 1075 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 ADAD1Q96M93 576 aaKnown RBP8.84□□□□□ -0.99
BRCA1-227ENST00000591849 FOXC2Q99958 501 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 ZNF426Q9BUY5 554 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 CRLF2Q9HC73 371 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 OBP2BQ9NPH6 170 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 KRCC1Q9NPI7 259 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-227ENST00000591849 MEPEQ9NQ76 525 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-227ENST00000591849 INIPQ9NRY2 104 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 BEX4Q9NWD9 120 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-227ENST00000591849 FAM53CQ9NYF3 392 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 TAS2R5Q9NYW4 299 aa8.84□□□□□ -0.99
BRCA1-227ENST00000591849 A0A1W2PPR1 153 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 hCG_2039718K7EN88 272 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 ABCD4O14678 606 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 ARPC2O15144 300 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 ARHGEF9O43307 516 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 PIP5K1CO60331 668 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms