RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 RFTN2Q52LD8 501 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-209ENST00000589941 AWAT1Q58HT5 328 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 BEX5Q5H9J7 111 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 TOR1AIP1Q5JTV8 583 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 UBE2UQ5VVX9 321 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 GTF2H2CQ6P1K8 395 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 FAHD1Q6P587 224 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 PLEKHG7Q6ZR37 379 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 PIWIL3Q7Z3Z3 882 aaKnown RBP6.85□□□□□ -1.31
SMAD4-209ENST00000589941 FAM9CQ8IZT9 166 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 CADM3Q8N126 398 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 OR4F6Q8NGB9 312 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 EEF1AKMT1Q8WVE0 214 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 SKA2Q8WVK7 121 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-209ENST00000589941 IPCEF1Q8WWN9 437 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-209ENST00000589941 SMPDL3AQ92484 453 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 FCGR1BQ92637 280 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 TESCQ96BS2 214 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 STARD4Q96DR4 205 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 ZBTB18Q99592 522 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 RHNO1Q9BSD3 238 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 ACTRT3Q9BYD9 372 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 SLIRPQ9GZT3 109 aaKnown RBP6.85□□□□□ -1.31
SMAD4-209ENST00000589941 RHBGQ9H310 441 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 PIGMQ9H3S5 423 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 RMND5AQ9H871 391 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 PARVBQ9HBI1 364 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 PLCXD1Q9NUJ7 323 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 FKBP14Q9NWM8 211 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 C1orf109Q9NX04 203 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 OSGIN1Q9UJX0 560 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 BOKQ9UMX3 212 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-209ENST00000589941 TPRKBQ9Y3C4 175 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 OARD1Q9Y530 152 aa6.85□□□□□ -1.31
SMAD4-209ENST00000589941 KCNE1BA0A087WTH5 132 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 A0A087WWL8 130 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 FAM157AC9JC47 383 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 GFYI3L273 518 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 EIF3FO00303 357 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-209ENST00000589941 PRMT5O14744 637 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-209ENST00000589941 MPPED1O15442 326 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 TAPBPO15533 448 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 NIPSNAP2O75323 286 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 SEC22BO75396 215 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 GMNNO75496 209 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 ANGPTL1O95841 491 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 TGM6O95932 706 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 PRPS2P11908 318 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 POU2F1P14859 743 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 HNF1AP20823 631 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 GGT5P36269 586 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 SERPINB10P48595 397 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 PPP5CP53041 499 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 NUDT6P53370 316 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 PNLIPRP1P54315 467 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 CLDN8P56748 225 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 TUBA1BP68363 451 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 SIRPAP78324 504 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 ITGADQ13349 1161 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 DGUOKQ16854 277 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 IMPG1Q17R60 797 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 ZNF791Q3KP31 576 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-209ENST00000589941 IQCCQ4KMZ1 466 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 TUBA1AQ71U36 451 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 ASPGQ86U10 573 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 SERPINA11Q86U17 422 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 P2RY8Q86VZ1 359 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 PM20D2Q8IYS1 436 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 RAB42Q8N4Z0 105 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 TMCO5AQ8N6Q1 288 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 OR7A2PQ8NGA2 310 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 OR10G3Q8NGC4 313 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 RHOXF1Q8NHV9 184 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 METTL6Q8TCB7 284 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 PAQR8Q8TEZ7 354 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 ZFP90Q8TF47 636 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 ASZ1Q8WWH4 475 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 PYURFQ96I23 114 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 TXNDC15Q96J42 360 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 TRAF4Q9BUZ4 470 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-209ENST00000589941 GABARAPL3Q9BY60 117 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 UBQLN3Q9H347 655 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 ARMC7Q9H6L4 198 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 QPCTLQ9NXS2 382 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 VNN3Q9NY84 501 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 CD274Q9NZQ7 290 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 C11orf21Q9P2W6 132 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 DAPK2Q9UIK4 370 aa6.84□□□□□ -1.31
SMAD4-209ENST00000589941 POLR3HQ9Y535 204 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-209ENST00000589941 CHCHD2Q9Y6H1 151 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-209ENST00000589941 PABPN1LA6NDY0 278 aaKnown RBP6.83□□□□□ -1.32
SMAD4-209ENST00000589941 FRG2CA6NGY1 282 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 METTL15A6NJ78 407 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 MANBAO00462 879 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 TRIM3O75382 744 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-209ENST00000589941 TRAPPC6AO75865 159 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 CCNDBP1O95273 360 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 SLC16A8O95907 504 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 HPNP05981 417 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 CYP4B1P13584 511 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms