RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 PGGHGQ32M88 737 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 C3orf36Q3SXR2 165 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 HIKESHIQ53FT3 197 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 RABL3Q5HYI8 236 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 ANKRD16Q6P6B7 361 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 HIST3H2AQ7L7L0 130 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 HDDC2Q7Z4H3 204 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 NANOGNBQ7Z5D8 188 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 KDM8Q8N371 416 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 MUC15Q8N387 334 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 WDR31Q8NA23 367 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 OR2T12Q8NG77 320 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 GPR32P1Q8NGA4 272 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 C10orf82Q8WW14 230 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 LZICQ8WZA0 190 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 HIST1H2ACQ93077 130 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 SLC41A3Q96GZ6 507 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 SLC38A2Q96QD8 506 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 KATNB1Q9BVA0 655 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 PCDHAC1Q9H158 963 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 NANSQ9NR45 359 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 B3GAT1Q9P2W7 334 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 SEC14L4Q9UDX3 406 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 SLC7A7Q9UM01 511 aa9.27□□□□□ -0.93
CLPTM1-211ENST00000589347 LOC100653049A0A140TA62 436 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 ZNF99A8MXY4 864 aaPredicted RBP9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 KPNA4O00629 521 aaPredicted RBP9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 NDUFAB1O14561 156 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 SMAD7O15105 426 aaKnown RBP9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 KRT34O76011 436 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 ZNF432O94892 652 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 CRYAAP02489 173 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 ADORA3P0DMS8 318 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 PTNP21246 168 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 TTKP33981 857 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 CAPZA2P47755 286 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 NUDT6P53370 316 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 CHRNB3Q05901 458 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 NPTX1Q15818 432 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 ZNF74Q16587 644 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 DEF8Q6ZN54 512 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 PXKQ7Z7A4 578 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 LSRQ86X29 649 aaPredicted RBP9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 CARM1Q86X55 608 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 CALHM3Q86XJ0 350 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 CCDC36Q8IYA8 594 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 OR6N1Q8NGY5 312 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 RP9Q8TA86 221 aaKnown RBP9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 RCN3Q96D15 328 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 LRR1Q96L50 414 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 OR2M2Q96R28 347 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 PRR14Q9BWN1 585 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 C1QTNF6Q9BXI9 259 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 CACNG6Q9BXT2 260 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 ULBP2Q9BZM5 246 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 CRLF2Q9HC73 371 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 GPR35Q9HC97 309 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 ZNF229Q9UJW7 825 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 USP22Q9UPT9 525 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 POFUT2Q9Y2G5 429 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 FKBP7Q9Y680 259 aa9.26□□□□□ -0.93
CLPTM1-211ENST00000589347 YLPM1P49750 1951 aaKnown RBP9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 ELOVL7A1L3X0 281 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 TRIM64A6NGJ6 449 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 TRIM64BA6NI03 449 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 E7EQL1 145 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 C11orf98E9PRG8 122 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 ATP6V1G2-DDX39BF2Z307 99 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 M0R3G1 203 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 PLPP3O14495 311 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 RNF13O43567 381 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 TPST2O60704 377 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 SERPINI2O75830 405 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 OR5F1O95221 314 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 CSF3P09919 207 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 THRBP10828 461 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 APOBEC3AP31941 199 aaPredicted RBP9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 RBM34P42696 430 aaKnown RBP9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 CSNK1A1P48729 337 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 GZMMP51124 257 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 SNRPD2P62316 118 aaKnown RBP9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 LGALS3BPQ08380 585 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 CEACAM16Q2WEN9 425 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 CYBRD1Q53TN4 286 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 CARD17Q5XLA6 110 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 CLEC2AQ6UVW9 174 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 LINC00114Q6XXX2 140 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 MICU2Q8IYU8 434 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 TMEM123Q8N131 208 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 FAM169BQ8N8A8 192 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 BCL2L2Q92843 193 aaPredicted RBP9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 MOGAT1Q96PD6 335 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 ARMCX1Q9P291 453 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 STX18Q9P2W9 335 aaKnown RBP9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 CRNNQ9UBG3 495 aaPredicted RBP9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 FBXO9Q9UK97 447 aaPredicted RBP9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 FBXL3Q9UKT7 428 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 SH3GLB1Q9Y371 365 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 PMF1-BGLAPU3KQ54 211 aa9.25□□□□□ -0.93
CLPTM1-211ENST00000589347 A0A096LPE4 126 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms