RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 ZNHIT1O43257 154 aa22.16■■□□□ 1.14
RFX1-205ENST00000589239 PPP1R3DO95685 299 aa22.16■■□□□ 1.14
RFX1-205ENST00000589239 CSNK2A1P68400 391 aaPredicted RBP22.16■■□□□ 1.14
RFX1-205ENST00000589239 HSF1Q00613 529 aa22.16■■□□□ 1.14
RFX1-205ENST00000589239 C3AR1Q16581 482 aa22.16■■□□□ 1.14
RFX1-205ENST00000589239 TEX19Q8NA77 164 aa22.16■■□□□ 1.14
RFX1-205ENST00000589239 LRRC75AQ8NAA5 344 aa22.16■■□□□ 1.14
RFX1-205ENST00000589239 SLC25A18Q9H1K4 315 aa22.16■■□□□ 1.14
RFX1-205ENST00000589239 DAPK2Q9UIK4 370 aa22.16■■□□□ 1.14
RFX1-205ENST00000589239 ADAM18Q9Y3Q7 739 aa22.16■■□□□ 1.14
RFX1-205ENST00000589239 IGHV3-15A0A0B4J1V0 119 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 CXCL13O43927 109 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 SERPINI2O75830 405 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 OR6A2O95222 327 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 CARD18P57730 90 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 ZNF846Q147U1 533 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 CNTNAP3BQ96NU0 1288 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 CNTNAP3Q9BZ76 1288 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 B3GALT5Q9Y2C3 310 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 MS4A18H0YCH9 400 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 RNF13O43567 381 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 CRYABP02511 175 aaKnown RBP22.15■■□□□ 1.14
RFX1-205ENST00000589239 P2RY4P51582 365 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 RAC3P60763 192 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 PUDPQ08623 228 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 PGGHGQ32M88 737 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 MS4A18Q3C1V0 323 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 CCDC103Q8IW40 242 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 ZNF845Q96IR2 970 aaPredicted RBP22.15■■□□□ 1.14
RFX1-205ENST00000589239 KATNB1Q9BVA0 655 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 TVP23BQ9NYZ1 205 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 AASSQ9UDR5 926 aa22.15■■□□□ 1.14
RFX1-205ENST00000589239 RAMP1O60894 148 aa22.14■■□□□ 1.13
RFX1-205ENST00000589239 PLGP00747 810 aaPredicted RBP22.14■■□□□ 1.13
RFX1-205ENST00000589239 MLLT10P55197 1068 aa22.14■■□□□ 1.13
RFX1-205ENST00000589239 H3F3AP84243 136 aa22.14■■□□□ 1.13
RFX1-205ENST00000589239 CD300CQ08708 224 aa22.14■■□□□ 1.13
RFX1-205ENST00000589239 C12orf73Q69YU5 71 aa22.14■■□□□ 1.13
RFX1-205ENST00000589239 PAQR6Q6TCH4 344 aa22.14■■□□□ 1.13
RFX1-205ENST00000589239 FAM180AQ6UWF9 173 aa22.14■■□□□ 1.13
RFX1-205ENST00000589239 DPY19L2P2Q6ZN68 376 aa22.14■■□□□ 1.13
RFX1-205ENST00000589239 C8orf59Q8N0T1 100 aaPredicted RBP22.14■■□□□ 1.13
RFX1-205ENST00000589239 UCN2Q96RP3 112 aa22.14■■□□□ 1.13
RFX1-205ENST00000589239 GPX7Q96SL4 187 aaPredicted RBP22.14■■□□□ 1.13
RFX1-205ENST00000589239 APOL4Q9BPW4 351 aa22.14■■□□□ 1.13
RFX1-205ENST00000589239 NRIP3Q9NQ35 241 aa22.14■■□□□ 1.13
RFX1-205ENST00000589239 PLSCR2Q9NRY7 297 aa22.14■■□□□ 1.13
RFX1-205ENST00000589239 ATRXP46100 2492 aa22.14■■□□□ 1.13
RFX1-205ENST00000589239 ENPP1P22413 925 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 CTXN1P60606 82 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 CDC42P60953 191 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 ERVK-25P63136 954 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 IL18R1Q13478 541 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 CASP12Q6UXS9 341 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 LNX2Q8N448 690 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 CISD2Q8N5K1 135 aaKnown RBP22.13■■□□□ 1.13
RFX1-205ENST00000589239 MEIOBQ8N635 442 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 RASSF1Q9NS23 344 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 IER3IP1Q9Y5U9 82 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 USP24Q9UPU5 2620 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 A0A1B0GVC2 190 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 CLDN25C9JDP6 229 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 HLA-DOBP13765 273 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 S100A1P23297 94 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 ISL1P61371 349 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 IL5RAQ01344 420 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 SLC35F1Q5T1Q4 408 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 ZBTB46Q86UZ6 589 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 ENTHD1Q8IYW4 607 aa22.13■■□□□ 1.13
RFX1-205ENST00000589239 ERMAPQ96PL5 475 aaPredicted RBP22.13■■□□□ 1.13
RFX1-205ENST00000589239 AQP7P3A6NL99 342 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 EIF1BO60739 113 aaKnown RBP22.12■■□□□ 1.13
RFX1-205ENST00000589239 FOXK2Q01167 660 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 LY6DQ14210 128 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 GPAT4Q86UL3 456 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 SLC43A2Q8N370 569 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 WDYHV1Q96HA8 205 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 WDR12Q9GZL7 423 aaKnown RBP22.12■■□□□ 1.13
RFX1-205ENST00000589239 IMPAD1Q9NX62 359 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 B3GAT1Q9P2W7 334 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 RNF6Q9Y252 685 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 A0A1B0GTH9 108 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 AQP7O14520 342 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 SLC2A10O95528 541 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 CD14P08571 375 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 NOS3P29474 1203 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 SNAPC1Q16533 368 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 PDSS1Q5T2R2 415 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 GTF2IRD2BQ6EKJ0 949 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 TMEM225Q6GV28 225 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 GTF2IRD2Q86UP8 949 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 POLDIP3Q9BY77 421 aaKnown RBP22.12■■□□□ 1.13
RFX1-205ENST00000589239 HMG20AQ9NP66 347 aa22.12■■□□□ 1.13
RFX1-205ENST00000589239 SPTA1P02549 2419 aa22.11■■□□□ 1.13
RFX1-205ENST00000589239 NPIPA2E9PIF3 369 aa22.11■■□□□ 1.13
RFX1-205ENST00000589239 NPIPA3F8WFD2 350 aa22.11■■□□□ 1.13
RFX1-205ENST00000589239 SMAD9O15198 467 aaKnown RBP22.11■■□□□ 1.13
RFX1-205ENST00000589239 OPRL1P41146 370 aa22.11■■□□□ 1.13
RFX1-205ENST00000589239 AGFG1P52594 562 aaKnown RBP22.11■■□□□ 1.13
RFX1-205ENST00000589239 ZP4Q12836 540 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms