RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 CLIP4Q8N3C7 705 aa13.06□□□□□ -0.32
IFT20-216ENST00000588477 MGARPQ8TDB4 240 aa13.06□□□□□ -0.32
IFT20-216ENST00000588477 RAB39BQ96DA2 213 aa13.06□□□□□ -0.32
IFT20-216ENST00000588477 KTI12Q96EK9 354 aaPredicted RBP13.06□□□□□ -0.32
IFT20-216ENST00000588477 PANX1Q96RD7 426 aa13.06□□□□□ -0.32
IFT20-216ENST00000588477 NTN4Q9HB63 628 aa13.06□□□□□ -0.32
IFT20-216ENST00000588477 MKS1Q9NXB0 559 aa13.06□□□□□ -0.32
IFT20-216ENST00000588477 ZNF346Q9UL40 294 aaKnown RBP13.06□□□□□ -0.32
IFT20-216ENST00000588477 TANC2Q9HCD6 1990 aa13.06□□□□□ -0.32
IFT20-216ENST00000588477 A0A0G2JK05 382 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 CCDC154A6NI56 674 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 J3QLI3 93 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 AKAP8O43823 692 aaKnown RBP13.05□□□□□ -0.32
IFT20-216ENST00000588477 SPAG7O75391 227 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 DEAF1O75398 565 aaPredicted RBP13.05□□□□□ -0.32
IFT20-216ENST00000588477 PRSS23O95084 383 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 FPR2P25090 351 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 S100A3P33764 101 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 CDKN2CP42773 168 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 RAB1AP62820 205 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 CCL8P80075 99 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 ZP4Q12836 540 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 NKPD1Q17RQ9 610 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 DPY19L1Q2PZI1 675 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 ZNF813Q6ZN06 617 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 ZNF621Q6ZSS3 439 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 SERPINA11Q86U17 422 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 TMEM123Q8N131 208 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 TRIML2Q8N7C3 387 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 TCP10LQ8TDR4 215 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 CCDC115Q96NT0 180 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 ZIM3Q96PE6 472 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 RHOXF2Q9BQY4 288 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 EMC6Q9BV81 110 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 C1QTNF5Q9BXJ0 243 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 C7orf69Q9H7B7 122 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 ZNF224Q9NZL3 707 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 BTNL2Q9UIR0 455 aa13.05□□□□□ -0.32
IFT20-216ENST00000588477 ZNF443Q9Y2A4 671 aaPredicted RBP13.05□□□□□ -0.32
IFT20-216ENST00000588477 TLDC2A0PJX2 215 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 M0R082 166 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 AIM2O14862 343 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 RAB36O95755 333 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 CLPTM1O96005 669 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 CBLP22681 906 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 GIPRP48546 466 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 CLNS1AP54105 237 aaKnown RBP13.04□□□□□ -0.32
IFT20-216ENST00000588477 TXNL4AP83876 142 aaKnown RBP13.04□□□□□ -0.32
IFT20-216ENST00000588477 LRRC34Q8IZ02 419 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 LRRC17Q8N6Y2 441 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 ZNF417Q8TAU3 575 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 DUX5Q96PT3 197 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 ZNF587Q96SQ5 575 aaPredicted RBP13.04□□□□□ -0.32
IFT20-216ENST00000588477 UNKLQ9H9P5 680 aaKnown RBP13.04□□□□□ -0.32
IFT20-216ENST00000588477 TAAR3PQ9P1P4 343 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 POFUT2Q9Y2G5 429 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 CHST2Q9Y4C5 530 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 VWFP04275 2813 aa13.04□□□□□ -0.32
IFT20-216ENST00000588477 CMYA5Q8N3K9 4069 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 C17orf100A8MU93 164 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 E9PBE3 544 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 TRAF3IP2O43734 574 aaPredicted RBP13.03□□□□□ -0.32
IFT20-216ENST00000588477 IGHV2-5P01817 119 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 NUDT17P0C025 328 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 B4GALT1P15291 398 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 GRPRP30550 384 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 CRYBB2P43320 205 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 RAD52P43351 418 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 NME5P56597 212 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 HOXC5Q00444 222 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 RAB39AQ14964 217 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 MFSD13AQ14CX5 517 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 LARS2Q15031 903 aaKnown RBP13.03□□□□□ -0.32
IFT20-216ENST00000588477 RNF220Q5VTB9 566 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 RGS7BPQ6MZT1 257 aaPredicted RBP13.03□□□□□ -0.32
IFT20-216ENST00000588477 TMEM154Q6P9G4 183 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 RBMS3Q6XE24 437 aaKnown RBP13.03□□□□□ -0.32
IFT20-216ENST00000588477 H1FNTQ75WM6 255 aaPredicted RBP13.03□□□□□ -0.32
IFT20-216ENST00000588477 C20orf196Q8IYI0 205 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 SIGLECL1Q8N7X8 197 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 ZNF781Q8N8C0 355 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 DVL3Q92997 716 aaPredicted RBP13.03□□□□□ -0.32
IFT20-216ENST00000588477 TAAR8Q969N4 342 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 TEX37Q96LM6 180 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 TSPAN32Q96QS1 320 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 P2RX2Q9UBL9 471 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 SLC7A8Q9UHI5 535 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 ZNF232Q9UNY5 417 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 WIPI2Q9Y4P8 454 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 DSPPQ9NZW4 1301 aa13.03□□□□□ -0.32
IFT20-216ENST00000588477 MS4A18H0YCH9 400 aa13.02□□□□□ -0.33
IFT20-216ENST00000588477 ITM2AO43736 263 aa13.02□□□□□ -0.33
IFT20-216ENST00000588477 OR2T1O43869 369 aa13.02□□□□□ -0.33
IFT20-216ENST00000588477 FSHBP01225 129 aa13.02□□□□□ -0.33
IFT20-216ENST00000588477 BCHEP06276 602 aa13.02□□□□□ -0.33
IFT20-216ENST00000588477 BPGMP07738 259 aa13.02□□□□□ -0.33
IFT20-216ENST00000588477 HLA-DOBP13765 273 aa13.02□□□□□ -0.33
IFT20-216ENST00000588477 PRTN3P24158 256 aa13.02□□□□□ -0.33
IFT20-216ENST00000588477 ZFP36P26651 326 aaKnown RBP13.02□□□□□ -0.33
IFT20-216ENST00000588477 LSP1P33241 339 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms