RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 PXKQ7Z7A4 578 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 TMEM123Q8N131 208 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 OR2T12Q8NG77 320 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 OR6N1Q8NGY5 312 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 HIST1H2ACQ93077 130 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 EMC6Q9BV81 110 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 SLC19A3Q9BZV2 496 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 MED29Q9NX70 200 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 USP22Q9UPT9 525 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 MOKQ9UQ07 419 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 AP3M1Q9Y2T2 418 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 MTORP42345 2549 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 C11orf98E9PRG8 122 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 ATP6V1G2-DDX39BF2Z307 99 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 LYPD3O95274 346 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 THY1P04216 161 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 UMPSP11172 480 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 CRYBA2P53672 197 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 TAS2R41P59536 307 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 TUBA1BP68363 451 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 TUBA4AP68366 448 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 ZNF74Q16587 644 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 WDR88Q6ZMY6 472 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 TUBA1AQ71U36 451 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 ARPINQ7Z6K5 226 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 C20orf196Q8IYI0 205 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 TXNDC15Q96J42 360 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 CACNG6Q9BXT2 260 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 NANSQ9NR45 359 aa17.07■□□□□ 0.32
TPM4-208ENST00000588410 RAI1Q7Z5J4 1906 aaPredicted RBP17.07■□□□□ 0.32
TPM4-208ENST00000588410 IGHV1-18A0A0C4DH31 117 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 SLC35F4A4IF30 521 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 IGHV4-39P01824 125 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 CRYAAP02489 173 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 HEXAP06865 529 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 BMP4P12644 408 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 COX4I1P13073 169 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 TNFRSF1BP20333 461 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 CAPZA2P47755 286 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 CHRNB3Q05901 458 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 CYBRD1Q53TN4 286 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 CCDC36Q8IYA8 594 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 MICU2Q8IYU8 434 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 LRR1Q96L50 414 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 KATNB1Q9BVA0 655 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 POLR2J2Q9GZM3 115 aaKnown RBP17.06■□□□□ 0.32
TPM4-208ENST00000588410 POLR2J3Q9H1A7 115 aaKnown RBP17.06■□□□□ 0.32
TPM4-208ENST00000588410 POFUT2Q9Y2G5 429 aa17.06■□□□□ 0.32
TPM4-208ENST00000588410 ROS1P08922 2347 aa17.05■□□□□ 0.32
TPM4-208ENST00000588410 MAP1AP78559 2803 aaPredicted RBP17.05■□□□□ 0.32
TPM4-208ENST00000588410 ELOVL7A1L3X0 281 aa17.05■□□□□ 0.32
TPM4-208ENST00000588410 ZNF99A8MXY4 864 aaPredicted RBP17.05■□□□□ 0.32
TPM4-208ENST00000588410 RNF13O43567 381 aa17.05■□□□□ 0.32
TPM4-208ENST00000588410 OR5F1O95221 314 aa17.05■□□□□ 0.32
TPM4-208ENST00000588410 LY6G6DO95868 133 aa17.05■□□□□ 0.32
TPM4-208ENST00000588410 APOBEC3AP31941 199 aaPredicted RBP17.05■□□□□ 0.32
TPM4-208ENST00000588410 KDELR2P33947 212 aa17.05■□□□□ 0.32
TPM4-208ENST00000588410 TNK1Q13470 666 aa17.05■□□□□ 0.32
TPM4-208ENST00000588410 CAMK2DQ13557 499 aa17.05■□□□□ 0.32
TPM4-208ENST00000588410 TSPYL5Q86VY4 417 aaPredicted RBP17.05■□□□□ 0.32
TPM4-208ENST00000588410 TPD52L3Q96J77 140 aa17.05■□□□□ 0.32
TPM4-208ENST00000588410 ULBP2Q9BZM5 246 aa17.05■□□□□ 0.32
TPM4-208ENST00000588410 NELFAQ9H3P2 528 aa17.05■□□□□ 0.32
TPM4-208ENST00000588410 ZNF229Q9UJW7 825 aa17.05■□□□□ 0.32
TPM4-208ENST00000588410 GDF2Q9UK05 429 aaPredicted RBP17.05■□□□□ 0.32
TPM4-208ENST00000588410 GSTA4O15217 222 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 SHOX2O60902 331 aaPredicted RBP17.04■□□□□ 0.32
TPM4-208ENST00000588410 NDUFS7O75251 213 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 IFNGR1P15260 489 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 CBR1P16152 277 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 IFNA8P32881 189 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 ACVR1BP36896 505 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 OR1E2P47887 323 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 CSNK1A1P48729 337 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 BIDP55957 195 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 ZP4Q12836 540 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 RAB35Q15286 201 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 C3orf36Q3SXR2 165 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 PHYHD1Q5SRE7 291 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 SLC35D2Q76EJ3 337 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 SPATA21Q7Z572 469 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 NANOGNBQ7Z5D8 188 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 FAM169BQ8N8A8 192 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 LZICQ8WZA0 190 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 ZNF837Q96EG3 531 aaPredicted RBP17.04■□□□□ 0.32
TPM4-208ENST00000588410 ELAC2Q9BQ52 826 aaKnown RBP17.04■□□□□ 0.32
TPM4-208ENST00000588410 PRSS27Q9BQR3 290 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 ZNF426Q9BUY5 554 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 EFCAB1Q9HAE3 211 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 CMTM6Q9NX76 183 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 CRNNQ9UBG3 495 aaPredicted RBP17.04■□□□□ 0.32
TPM4-208ENST00000588410 RIMS3Q9UJD0 308 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 PMF1-BGLAPU3KQ54 211 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 DSCAMO60469 2012 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 PRR14LQ5THK1 2151 aa17.04■□□□□ 0.32
TPM4-208ENST00000588410 SSX4O60224 188 aa17.03■□□□□ 0.32
TPM4-208ENST00000588410 SEC14L2O76054 403 aa17.03■□□□□ 0.32
TPM4-208ENST00000588410 CECR9P0C854 216 aa17.03■□□□□ 0.32
TPM4-208ENST00000588410 ARR3P36575 388 aa17.03■□□□□ 0.32
TPM4-208ENST00000588410 RBM34P42696 430 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms