RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 FFAR1O14842 300 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 ARPC2O15144 300 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 TMCC2O75069 709 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 UPK3AO75631 287 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 BCL10O95999 233 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 T-ENOLP0DO92 83 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 HLA-DOBP13765 273 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 IFNGR1P15260 489 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 YAP1P46937 504 aaKnown RBP8.87□□□□□ -0.99
TPM4-207ENST00000588032 IST1P53990 364 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 FOXG1P55316 489 aaPredicted RBP8.87□□□□□ -0.99
TPM4-207ENST00000588032 SMIM11AP58511 58 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 ROR2Q01974 943 aaKnown RBP8.87□□□□□ -0.99
TPM4-207ENST00000588032 PRKCDQ05655 676 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 DGCR6Q14129 220 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 MTX3Q5HYI7 312 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 C9orf135Q5VTT2 229 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 SEZ6L2Q6UXD5 910 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 TMEM108Q6UXF1 575 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 ZNF704Q6ZNC4 412 aaPredicted RBP8.87□□□□□ -0.99
TPM4-207ENST00000588032 SLC35D2Q76EJ3 337 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 TRPM8Q7Z2W7 1104 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 HDDC2Q7Z4H3 204 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 C20orf196Q8IYI0 205 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 WDR31Q8NA23 367 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 FAM156AQ8NDB6 213 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 RBM15BQ8NDT2 890 aaKnown RBP8.87□□□□□ -0.99
TPM4-207ENST00000588032 OR1K1Q8NGR3 316 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 OR52N5Q8NH56 324 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 PFN4Q8NHR9 129 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 ACOT11Q8WXI4 607 aaPredicted RBP8.87□□□□□ -0.99
TPM4-207ENST00000588032 NRGNQ92686 78 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 MCUR1Q96AQ8 359 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 BPIFA2Q96DR5 249 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 TXNDC15Q96J42 360 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 C7orf34Q96L11 122 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 PIP5K1AQ99755 562 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 FOXC2Q99958 501 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 LIME1Q9H400 295 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 NMNAT1Q9HAN9 279 aaPredicted RBP8.87□□□□□ -0.99
TPM4-207ENST00000588032 GPR35Q9HC97 309 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 MED29Q9NX70 200 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 NDUFAF4Q9P032 175 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 ACTR3BQ9P1U1 418 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 STX18Q9P2W9 335 aaKnown RBP8.87□□□□□ -0.99
TPM4-207ENST00000588032 ITGB1BP2Q9UKP3 347 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 PRPF19Q9UMS4 504 aaKnown RBP8.87□□□□□ -0.99
TPM4-207ENST00000588032 RNF115Q9Y4L5 304 aa8.87□□□□□ -0.99
TPM4-207ENST00000588032 ANKHD1Q8IWZ3 2542 aaKnown RBP8.86□□□□□ -0.99
TPM4-207ENST00000588032 ARPC4-TTLL3A0A0A6YYG9 625 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 DPRXA6NFQ7 191 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 NPIPB13A6NJU9 1138 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 CENPBD1B2RD01 187 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 NPIPB4C9JG80 1138 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 J3KTA2 159 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 HS3ST1O14792 307 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 ENTPD5O75356 428 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 PRSS23O95084 383 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 ATE1O95260 518 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 H1F0P07305 194 aaKnown RBP8.86□□□□□ -0.99
TPM4-207ENST00000588032 TSPAN19P0C672 248 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 IFI30P13284 250 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 CDH2P19022 906 aaPredicted RBP8.86□□□□□ -0.99
TPM4-207ENST00000588032 SLC9A3P48764 834 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 DAP3P51398 398 aaKnown RBP8.86□□□□□ -0.99
TPM4-207ENST00000588032 BIDP55957 195 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 UBE2NP61088 152 aaKnown RBP8.86□□□□□ -0.99
TPM4-207ENST00000588032 RPL18Q07020 188 aaKnown RBP8.86□□□□□ -0.99
TPM4-207ENST00000588032 BSPH1Q075Z2 132 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 FOXD4Q12950 439 aaPredicted RBP8.86□□□□□ -0.99
TPM4-207ENST00000588032 TAF11Q15544 211 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 ZNF730Q6ZMV8 503 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 TMPRSS11FQ6ZWK6 438 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 MBOAT2Q6ZWT7 520 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 TSEN54Q7Z6J9 526 aaKnown RBP8.86□□□□□ -0.99
TPM4-207ENST00000588032 DEPDC4Q8N2C3 294 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 ZNF611Q8N823 705 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 FAM169BQ8N8A8 192 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 OR6N1Q8NGY5 312 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 BCL2L2Q92843 193 aaPredicted RBP8.86□□□□□ -0.99
TPM4-207ENST00000588032 ZNF566Q969W8 418 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 SLC25A44Q96H78 314 aaPredicted RBP8.86□□□□□ -0.99
TPM4-207ENST00000588032 ALKBH3Q96Q83 286 aaPredicted RBP8.86□□□□□ -0.99
TPM4-207ENST00000588032 ALPK1Q96QP1 1244 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 ZNF347Q96SE7 839 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 EMC6Q9BV81 110 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 CRLF2Q9HC73 371 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 KRCC1Q9NPI7 259 aaPredicted RBP8.86□□□□□ -0.99
TPM4-207ENST00000588032 INIPQ9NRY2 104 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 MAN2C1Q9NTJ4 1040 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 C20orf141Q9NUB4 165 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 CCM2LQ9NUG4 571 aaPredicted RBP8.86□□□□□ -0.99
TPM4-207ENST00000588032 BEX4Q9NWD9 120 aaPredicted RBP8.86□□□□□ -0.99
TPM4-207ENST00000588032 RHCGQ9UBD6 479 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 TMEM5Q9Y2B1 443 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 PLEKHA6Q9Y2H5 1048 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 FREM1Q5H8C1 2179 aa8.86□□□□□ -0.99
TPM4-207ENST00000588032 A0A087WUU8 490 aa8.85□□□□□ -0.99
TPM4-207ENST00000588032 ZNF99A8MXY4 864 aaPredicted RBP8.85□□□□□ -0.99
TPM4-207ENST00000588032 EFCAB9A8MZ26 197 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms