RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 SERPINB7O75635 380 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 SERPINI2O75830 405 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 IFNA2P01563 188 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 OPN1SWP03999 348 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 PAX7P23759 505 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 NR4A2P43354 598 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 MTPNP58546 118 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 LSM11P83369 360 aaKnown RBP eCLIP12.43□□□□□ -0.42
VMP1-206ENST00000587945 POU3F1Q03052 451 aaPredicted RBP12.43□□□□□ -0.42
VMP1-206ENST00000587945 PMS2P3Q13401 168 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 EFNB3Q15768 340 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 DUSP7Q16829 419 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 PODNL1Q6PEZ8 512 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 NHLRC1Q6VVB1 395 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 RETREG3Q86VR2 466 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 C20orf196Q8IYI0 205 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 ZCCHC24Q8N2G6 241 aaKnown RBP12.43□□□□□ -0.42
VMP1-206ENST00000587945 ARIH2OSQ8N7S6 290 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 ADPRHL1Q8NDY3 354 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 GPR32P1Q8NGA4 272 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 SPATA3Q8NHX4 192 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 SLC41A3Q96GZ6 507 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 EPYCQ99645 322 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 MCHR1Q99705 422 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 ASPNQ9BXN1 380 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 PLK3Q9H4B4 646 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 NOX3Q9HBY0 568 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 INTS9Q9NV88 658 aaKnown RBP12.43□□□□□ -0.42
VMP1-206ENST00000587945 CORO2BQ9UQ03 480 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 ANGPT4Q9Y264 503 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 CORINQ9Y5Q5 1042 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 COL6A5A8TX70 2615 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 IGHV4-61A0A0C4DH41 118 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 ZNF99A8MXY4 864 aaPredicted RBP12.42□□□□□ -0.42
VMP1-206ENST00000587945 hCG_2039718K7EN88 272 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 M0QX08 132 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 AKAP8O43823 692 aaKnown RBP12.42□□□□□ -0.42
VMP1-206ENST00000587945 PDE5AO76074 875 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 HLA-HP01893 362 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 PCBP3P57721 371 aaKnown RBP12.42□□□□□ -0.42
VMP1-206ENST00000587945 CAMK2DQ13557 499 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 MFSD13AQ14CX5 517 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 NPTX1Q15818 432 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 CYP51A1Q16850 503 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 DHDDSQ86SQ9 333 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 RANBP3LQ86VV4 465 aaPredicted RBP12.42□□□□□ -0.42
VMP1-206ENST00000587945 RBM45Q8IUH3 476 aaKnown RBP12.42□□□□□ -0.42
VMP1-206ENST00000587945 SVOPLQ8N434 492 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 SCAIQ8N9R8 606 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 C11orf65Q8NCR3 313 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 NUP37Q8NFH4 326 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 OR4D11Q8NGI4 311 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 OR6S1Q8NH40 331 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 MS4A3Q96HJ5 214 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 CGREF1Q99674 301 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 ARHGDIGQ99819 225 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 PIMREGQ9BSJ6 248 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 MRPL39Q9NYK5 338 aaKnown RBP12.42□□□□□ -0.42
VMP1-206ENST00000587945 LEF1Q9UJU2 399 aaPredicted RBP12.42□□□□□ -0.42
VMP1-206ENST00000587945 CDC42EP3Q9UKI2 254 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 NDUFAF1Q9Y375 327 aa12.42□□□□□ -0.42
VMP1-206ENST00000587945 CHD3Q12873 2000 aaKnown RBP12.42□□□□□ -0.42
VMP1-206ENST00000587945 SVEP1Q4LDE5 3571 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 TMEM129A0AVI4 362 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 SH3PXD2BA1X283 911 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 C11orf98E9PRG8 122 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 PLPP3O14495 311 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 THY1P04216 161 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 FAM157CP0CG43 387 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 CD79AP11912 226 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 NPR2P20594 1047 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 AHCYP23526 432 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 ARR3P36575 388 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 PIGFQ07326 219 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 PUDPQ08623 228 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 KRT80Q6KB66 452 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 WDR88Q6ZMY6 472 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 ZNF813Q6ZN06 617 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 SPATA21Q7Z572 469 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 BHLHE22Q8NFJ8 381 aaPredicted RBP12.41□□□□□ -0.42
VMP1-206ENST00000587945 OR6T1Q8NGN1 323 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 VANGL1Q8TAA9 524 aaPredicted RBP12.41□□□□□ -0.42
VMP1-206ENST00000587945 CKAP2Q8WWK9 683 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 ANKRD27Q96NW4 1050 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 DOK1Q99704 481 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 TMEM43Q9BTV4 400 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 BEX2Q9BXY8 128 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 RABEP2Q9H5N1 569 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 ZNF385DQ9H6B1 395 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 ZNF442Q9H7R0 627 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 MOV10Q9HCE1 1003 aaKnown RBP12.41□□□□□ -0.42
VMP1-206ENST00000587945 B3GNT2Q9NY97 397 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 USP22Q9UPT9 525 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 POFUT2Q9Y2G5 429 aa12.41□□□□□ -0.42
VMP1-206ENST00000587945 LOC390937A0A1W2PQ73 354 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 CPSF4LA6NMK7 179 aaKnown RBP12.4□□□□□ -0.42
VMP1-206ENST00000587945 ZNF726A6NNF4 738 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 NDUFS8O00217 210 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 ANGPT2O15123 496 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 LMX1BO60663 402 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms