RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 PCBP3P57721 371 aaKnown RBP16.28■□□□□ 0.2
TRIM47-205ENST00000587774 HGFACQ04756 655 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 GGTLC2Q14390 218 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 MFSD13AQ14CX5 517 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 CARD17Q5XLA6 110 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 DHDDSQ86SQ9 333 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 MDP1Q86V88 176 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 RANBP3LQ86VV4 465 aaPredicted RBP16.28■□□□□ 0.2
TRIM47-205ENST00000587774 PTOV1Q86YD1 416 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 WDFY1Q8IWB7 410 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 SCAIQ8N9R8 606 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 SMYD1Q8NB12 490 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 NUP37Q8NFH4 326 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 BHLHE22Q8NFJ8 381 aaPredicted RBP16.28■□□□□ 0.2
TRIM47-205ENST00000587774 OR4F15Q8NGB8 312 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 OR6S1Q8NH40 331 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 SPATA3Q8NHX4 192 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 THOC1Q96FV9 657 aaKnown RBP16.28■□□□□ 0.2
TRIM47-205ENST00000587774 EPYCQ99645 322 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 PIMREGQ9BSJ6 248 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 EMC6Q9BV81 110 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 PLK3Q9H4B4 646 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 TMEM27Q9HBJ8 222 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 CDC42EP3Q9UKI2 254 aa16.28■□□□□ 0.2
TRIM47-205ENST00000587774 IGHV2OR16-5A0A0B4J2B6 119 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 M0R3H8 397 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 NDUFS8O00217 210 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 IFNA2P01563 188 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 CAPZA2P47755 286 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 PPOXP50336 477 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 MTPNP58546 118 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 LSM11P83369 360 aaKnown RBP eCLIP16.27■□□□□ 0.2
TRIM47-205ENST00000587774 SELPLGQ14242 412 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 RUNDC3AQ59EK9 446 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 SWT1Q5T5J6 900 aaKnown RBP16.27■□□□□ 0.2
TRIM47-205ENST00000587774 CYB5R2Q6BCY4 276 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 C20orf196Q8IYI0 205 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 KCNK17Q96T54 332 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 TMEM43Q9BTV4 400 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 ASPNQ9BXN1 380 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 ZNF385DQ9H6B1 395 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 ZNF442Q9H7R0 627 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 MED29Q9NX70 200 aa16.27■□□□□ 0.2
TRIM47-205ENST00000587774 MRPL39Q9NYK5 338 aaKnown RBP16.27■□□□□ 0.2
TRIM47-205ENST00000587774 LEF1Q9UJU2 399 aaPredicted RBP16.27■□□□□ 0.2
TRIM47-205ENST00000587774 OPN1SWP03999 348 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 FAM157CP0CG43 387 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 THBS4P35443 961 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 ARR3P36575 388 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 NR4A2P43354 598 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 PUDPQ08623 228 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 PMS2P3Q13401 168 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 CARTPTQ16568 116 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 CYP51A1Q16850 503 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 RETREG3Q86VR2 466 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 C11orf65Q8NCR3 313 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 ANKRD27Q96NW4 1050 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 ARHGDIGQ99819 225 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 RABEP2Q9H5N1 569 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 NOX3Q9HBY0 568 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 MYOZ1Q9NP98 299 aaPredicted RBP16.26■□□□□ 0.19
TRIM47-205ENST00000587774 INTS9Q9NV88 658 aaKnown RBP16.26■□□□□ 0.19
TRIM47-205ENST00000587774 TMEM160Q9NX00 188 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 USP22Q9UPT9 525 aa16.26■□□□□ 0.19
TRIM47-205ENST00000587774 LOC390937A0A1W2PQ73 354 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 SLC35F4A4IF30 521 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 hCG_2039718K7EN88 272 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 SERPINI2O75830 405 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 HLA-HP01893 362 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 CAMK2DQ13557 499 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 NPTX1Q15818 432 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 DUSP7Q16829 419 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 NHLRC1Q6VVB1 395 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 SVOPLQ8N434 492 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 C10orf53Q8N6V4 93 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 GPR32P1Q8NGA4 272 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 STON2Q8WXE9 905 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 TXNDC15Q96J42 360 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 FOXN4Q96NZ1 517 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 MCHR1Q99705 422 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 EVA1AQ9H8M9 152 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 NDUFAF1Q9Y375 327 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 NOX1Q9Y5S8 564 aa16.25■□□□□ 0.19
TRIM47-205ENST00000587774 TANC2Q9HCD6 1990 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 IGHV4-61A0A0C4DH41 118 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 RNF212BA8MTL3 300 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 PLPP3O14495 311 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 ANGPT2O15123 496 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 CHP2O43745 196 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 FMO6PO60774 539 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 B4GALT1P15291 398 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 NPR2P20594 1047 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 GZMKP49863 264 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 RBBP4Q09028 425 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 SNTB2Q13425 540 aaKnown RBP16.24■□□□□ 0.19
TRIM47-205ENST00000587774 KRT80Q6KB66 452 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 ZNF613Q6PF04 617 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 WDR88Q6ZMY6 472 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 ZNF813Q6ZN06 617 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 SPATA21Q7Z572 469 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms