RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 MS4A18Q3C1V0 323 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 GTDC1Q4AE62 458 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 TNFAIP8L3Q5GJ75 292 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 ELFN2Q5R3F8 820 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 PHYHD1Q5SRE7 291 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 WDR93Q6P2C0 686 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 ZNF627Q7L945 461 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 GLCCI1Q86VQ1 547 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 C20orf196Q8IYI0 205 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 ADPRHL1Q8NDY3 354 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 DNAJA4Q8WW22 397 aaPredicted RBP12.1□□□□□ -0.47
DNMT1-213ENST00000587604 MS4A3Q96HJ5 214 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 ZNF75AQ96N20 296 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 PAIP2Q9BPZ3 127 aaKnown RBP12.1□□□□□ -0.47
DNMT1-213ENST00000587604 A4GALTQ9NPC4 353 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 SDR39U1Q9NRG7 319 aaPredicted RBP12.1□□□□□ -0.47
DNMT1-213ENST00000587604 THAP1Q9NVV9 213 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 ZIM2Q9NZV7 527 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 MGAM2Q2M2H8 2515 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 IGKV1D-42A0A075B6H8 117 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 A0A1B0GWA3 101 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 VENTXO95231 258 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 NUDT7P0C024 238 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 CD79AP11912 226 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 BMP2P12643 396 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 ZNF14P17017 642 aaPredicted RBP12.09□□□□□ -0.47
DNMT1-213ENST00000587604 ACHEP22303 614 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 COL8A2P25067 703 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 CFPP27918 469 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 PRKAR1BP31321 381 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 GPR6P46095 362 aaPredicted RBP12.09□□□□□ -0.47
DNMT1-213ENST00000587604 TMEM33P57088 247 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 PIGFQ07326 219 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 TRMT5Q32P41 509 aaKnown RBP12.09□□□□□ -0.47
DNMT1-213ENST00000587604 C6orf10Q5SRN2 563 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 REP15Q6BDI9 236 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 NXNQ6DKJ4 435 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 ZNF813Q6ZN06 617 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 UEVLDQ8IX04 471 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 OR6S1Q8NH40 331 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 BBS10Q8TAM1 723 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 RDH5Q92781 318 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 MAL2Q969L2 176 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 TMEM186Q96B77 213 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 SLC41A3Q96GZ6 507 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 MAELQ96JY0 434 aaKnown RBP12.09□□□□□ -0.47
DNMT1-213ENST00000587604 RACGAP1Q9H0H5 632 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 RAD21L1Q9H4I0 556 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 DENND2DQ9H6A0 471 aaPredicted RBP12.09□□□□□ -0.47
DNMT1-213ENST00000587604 METTL17Q9H7H0 456 aaPredicted RBP12.09□□□□□ -0.47
DNMT1-213ENST00000587604 B3GAT2Q9NPZ5 323 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 KLHL14Q9P2G3 628 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 CORINQ9Y5Q5 1042 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 NOX1Q9Y5S8 564 aa12.09□□□□□ -0.47
DNMT1-213ENST00000587604 A0A087WUJ7 227 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 CLIC1O00299 241 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 SNNO75324 88 aaPredicted RBP12.08□□□□□ -0.48
DNMT1-213ENST00000587604 HPRP00739 348 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 HPXP02790 462 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 KITP10721 976 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 HLA-DOBP13765 273 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 ETS2P15036 469 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 NQO1P15559 274 aaKnown RBP12.08□□□□□ -0.48
DNMT1-213ENST00000587604 CBLP22681 906 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 HTR2AP28223 471 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 POLR2JP52435 117 aaKnown RBP12.08□□□□□ -0.48
DNMT1-213ENST00000587604 MRPS11P82912 194 aaKnown RBP12.08□□□□□ -0.48
DNMT1-213ENST00000587604 FADDQ13158 208 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 SCGB2A2Q13296 93 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 ALG10BQ5I7T1 473 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 HHATQ5VTY9 493 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 CARD17Q5XLA6 110 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 FAM91A1Q658Y4 838 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 ULK3Q6PHR2 472 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 NHLRC1Q6VVB1 395 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 CARM1Q86X55 608 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 SNX32Q86XE0 403 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 SCAIQ8N9R8 606 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 SEMA6DQ8NFY4 1073 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 CLDND2Q8NHS1 167 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 GTF2H4Q92759 462 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 EMC6Q9BV81 110 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 RSPO3Q9BXY4 272 aaPredicted RBP12.08□□□□□ -0.48
DNMT1-213ENST00000587604 PLA2G12AQ9BZM1 189 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 CENPHQ9H3R5 247 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 HIF1ANQ9NWT6 349 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 POFUT2Q9Y2G5 429 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 GRIP1Q9Y3R0 1128 aa12.08□□□□□ -0.48
DNMT1-213ENST00000587604 ZNF726A6NNF4 738 aa12.07□□□□□ -0.48
DNMT1-213ENST00000587604 C5orf58C9J3I9 102 aa12.07□□□□□ -0.48
DNMT1-213ENST00000587604 FAM157AC9JC47 383 aa12.07□□□□□ -0.48
DNMT1-213ENST00000587604 TFP02787 698 aa12.07□□□□□ -0.48
DNMT1-213ENST00000587604 MSMBP08118 114 aa12.07□□□□□ -0.48
DNMT1-213ENST00000587604 SAGP10523 405 aaPredicted RBP12.07□□□□□ -0.48
DNMT1-213ENST00000587604 TCN1P20061 433 aaPredicted RBP12.07□□□□□ -0.48
DNMT1-213ENST00000587604 ALDH3B1P43353 468 aa12.07□□□□□ -0.48
DNMT1-213ENST00000587604 PTDSS1P48651 473 aaKnown RBP12.07□□□□□ -0.48
DNMT1-213ENST00000587604 SEC24CP53992 1094 aa12.07□□□□□ -0.48
DNMT1-213ENST00000587604 AQP5P55064 265 aa12.07□□□□□ -0.48
DNMT1-213ENST00000587604 WDR4P57081 412 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms