RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 THAP1Q9NVV9 213 aa12.45□□□□□ -0.42
SDF2-202ENST00000585428 M0R3G1 203 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 GPR37O15354 613 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 ANP32DO95626 131 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 HPRP00739 348 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 HLA-DOBP13765 273 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 PCMT1P22061 227 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 GRPRP30550 384 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 GLRXP35754 106 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 AQP5P55064 265 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 TMEM33P57088 247 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 IL1RL1Q01638 556 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 CCNIQ14094 377 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 FXNQ16595 210 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 MSANTD1Q6ZTZ1 278 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 WDFY1Q8IWB7 410 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 ADPRHL1Q8NDY3 354 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 OR6S1Q8NH40 331 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 CLDND2Q8NHS1 167 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 DNAJA4Q8WW22 397 aaPredicted RBP12.44□□□□□ -0.42
SDF2-202ENST00000585428 GTF2H4Q92759 462 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 SLC38A4Q969I6 547 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 MAL2Q969L2 176 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 ITCHQ96J02 903 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 TXNDC15Q96J42 360 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 PLA2G12AQ9BZM1 189 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 DENND2DQ9H6A0 471 aaPredicted RBP12.44□□□□□ -0.42
SDF2-202ENST00000585428 RMND5AQ9H871 391 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 KCNK9Q9NPC2 374 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 A4GALTQ9NPC4 353 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 ZNF224Q9NZL3 707 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 ZIM2Q9NZV7 527 aa12.44□□□□□ -0.42
SDF2-202ENST00000585428 TRAV36DV7A0A075B6V5 113 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 A0A1B0GWA3 101 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 TMEM247A6NEH6 219 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 CLIC1O00299 241 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 WNT9BO14905 357 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 SEC14L2O76054 403 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 HPXP02790 462 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 CD79AP11912 226 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 ETS2P15036 469 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 HOXB9P17482 250 aaPredicted RBP12.43□□□□□ -0.42
SDF2-202ENST00000585428 TCN1P20061 433 aaPredicted RBP12.43□□□□□ -0.42
SDF2-202ENST00000585428 HTR2AP28223 471 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 GTF2E2P29084 291 aaKnown RBP12.43□□□□□ -0.42
SDF2-202ENST00000585428 CAPZA2P47755 286 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 SEC24CP53992 1094 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 WDR4P57081 412 aaKnown RBP12.43□□□□□ -0.42
SDF2-202ENST00000585428 PIGFQ07326 219 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 GSG1Q2KHT4 349 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 C12orf54Q6X4T0 127 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 COMTD1Q86VU5 262 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 LRP11Q86VZ4 500 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 SEMA6DQ8NFY4 1073 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 RDH5Q92781 318 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 TMEM186Q96B77 213 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 EMC6Q9BV81 110 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 PAIP1Q9H074 479 aaKnown RBP12.43□□□□□ -0.42
SDF2-202ENST00000585428 METTL17Q9H7H0 456 aaPredicted RBP12.43□□□□□ -0.42
SDF2-202ENST00000585428 HIF1ANQ9NWT6 349 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 KLHL14Q9P2G3 628 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 RPS6KB2Q9UBS0 482 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 SPEF1Q9Y4P9 236 aa12.43□□□□□ -0.42
SDF2-202ENST00000585428 A0A087WUJ7 227 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 FAM157AC9JC47 383 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 M0R233 179 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 AKAP8O43823 692 aaKnown RBP12.42□□□□□ -0.42
SDF2-202ENST00000585428 TPST1O60507 370 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 KITP10721 976 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 ACHEP22303 614 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 CBLP22681 906 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 PRKAR1BP31321 381 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 COMPP49747 757 aaPredicted RBP12.42□□□□□ -0.42
SDF2-202ENST00000585428 POLR2JP52435 117 aaKnown RBP12.42□□□□□ -0.42
SDF2-202ENST00000585428 LMO4P61968 165 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 RAB1AP62820 205 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 MRPS11P82912 194 aaKnown RBP12.42□□□□□ -0.42
SDF2-202ENST00000585428 MFSD13AQ14CX5 517 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 CARD17Q5XLA6 110 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 ULK3Q6PHR2 472 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 RINLQ6ZS11 566 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 GLCCI1Q86VQ1 547 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 UEVLDQ8IX04 471 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 BBS10Q8TAM1 723 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 YIPF5Q969M3 257 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 PAIP2Q9BPZ3 127 aaKnown RBP12.42□□□□□ -0.42
SDF2-202ENST00000585428 CACYBPQ9HB71 228 aaKnown RBP12.42□□□□□ -0.42
SDF2-202ENST00000585428 CORINQ9Y5Q5 1042 aa12.42□□□□□ -0.42
SDF2-202ENST00000585428 TPST2O60704 377 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 BGLAPP02818 100 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 MSMBP08118 114 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 ALDH3B1P43353 468 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 GPR6P46095 362 aaPredicted RBP12.41□□□□□ -0.42
SDF2-202ENST00000585428 FADDQ13158 208 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 TRMT5Q32P41 509 aaKnown RBP12.41□□□□□ -0.42
SDF2-202ENST00000585428 ALG10BQ5I7T1 473 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 FAM91A1Q658Y4 838 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 NXNQ6DKJ4 435 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 DHRS4L2Q6PKH6 230 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 ZNF813Q6ZN06 617 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms