RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 FAM91A1Q658Y4 838 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 ULK3Q6PHR2 472 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 MAVSQ7Z434 540 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 MDP1Q86V88 176 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 C20orf196Q8IYI0 205 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 MIER2Q8N344 545 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 LINC01356Q8N9X3 169 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 OR9I1Q8NGQ6 314 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 OR6S1Q8NH40 331 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 CKAP2Q8WWK9 683 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 ZNF75AQ96N20 296 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 OR52B2Q96RD2 323 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 NOX3Q9HBY0 568 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.15□□□□□ -0.94
RFFL-209ENST00000581265 TMEFF2Q9UIK5 374 aaPredicted RBP9.15□□□□□ -0.94
RFFL-209ENST00000581265 RAB21Q9UL25 225 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 CMAHPQ9Y471 501 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 GMEB1Q9Y692 573 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 V9GYY5 206 aaPredicted RBP9.15□□□□□ -0.94
RFFL-209ENST00000581265 A0A087WUJ7 227 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 C5orf58C9J3I9 102 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 M0R3G1 203 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 TCF21O43680 179 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 SYNGR3O43761 229 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 HPRP00739 348 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 ZNF35P13682 527 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 IFNGR1P15260 489 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 APEX1P27695 318 aaKnown RBP9.14□□□□□ -0.95
RFFL-209ENST00000581265 HTR2AP28223 471 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 MRPL19P49406 292 aaKnown RBP9.14□□□□□ -0.95
RFFL-209ENST00000581265 CDH15P55291 814 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 NPRL3Q12980 569 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 SNTB2Q13425 540 aaKnown RBP9.14□□□□□ -0.95
RFFL-209ENST00000581265 PDLIM3Q53GG5 364 aaPredicted RBP9.14□□□□□ -0.95
RFFL-209ENST00000581265 ALG10BQ5I7T1 473 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 PHYHD1Q5SRE7 291 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 LRIF1Q5T3J3 769 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 DHRS4L2Q6PKH6 230 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 SLC2A7Q6PXP3 512 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 COMTD1Q86VU5 262 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 MEX3DQ86XN8 651 aaKnown RBP9.14□□□□□ -0.95
RFFL-209ENST00000581265 UEVLDQ8IX04 471 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 CDK20Q8IZL9 346 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 SCAIQ8N9R8 606 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 ZBTB9Q96C00 473 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 SLC47A1Q96FL8 570 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 MS4A5Q9H3V2 200 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 DENND2DQ9H6A0 471 aaPredicted RBP9.14□□□□□ -0.95
RFFL-209ENST00000581265 DYNLRB1Q9NP97 96 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 SLC25A37Q9NYZ2 338 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 KLHL14Q9P2G3 628 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 CORINQ9Y5Q5 1042 aa9.14□□□□□ -0.95
RFFL-209ENST00000581265 TPST1O60507 370 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 SEC14L2O76054 403 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 HLA-HP01893 362 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 ARAFP10398 606 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 HLA-DOBP13765 273 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 ZNF14P17017 642 aaPredicted RBP9.13□□□□□ -0.95
RFFL-209ENST00000581265 GLRXP35754 106 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 CAPZA2P47755 286 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 DVL1P1P54792 670 aaPredicted RBP9.13□□□□□ -0.95
RFFL-209ENST00000581265 CDK6Q00534 326 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 TRIP10Q15642 601 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 MSMPQ1L6U9 139 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 GSG1Q2KHT4 349 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 KRT80Q6KB66 452 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 REEP3Q6NUK4 255 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 BLOC1S3Q6QNY0 202 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 EPGNQ6UW88 154 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 PXKQ7Z7A4 578 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 KRT73Q86Y46 540 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 MSRB3Q8IXL7 192 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 GOLGA6L1Q8N7Z2 621 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 C3orf56Q8N813 242 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 MGARPQ8TDB4 240 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 MRPL24Q96A35 216 aaKnown RBP9.13□□□□□ -0.95
RFFL-209ENST00000581265 MS4A3Q96HJ5 214 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 TXNDC15Q96J42 360 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 SNX18Q96RF0 628 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 EPYCQ99645 322 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 EMC6Q9BV81 110 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 SPATA5L1Q9BVQ7 753 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 MRPL37Q9BZE1 423 aaKnown RBP9.13□□□□□ -0.95
RFFL-209ENST00000581265 MRPL39Q9NYK5 338 aaKnown RBP9.13□□□□□ -0.95
RFFL-209ENST00000581265 SLAMF8Q9P0V8 285 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 REV1Q9UBZ9 1251 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 SPEF1Q9Y4P9 236 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 NOX1Q9Y5S8 564 aa9.13□□□□□ -0.95
RFFL-209ENST00000581265 A0A0B4J2E0 115 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 A0A1B0GX12 115 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 PRORSD1PA6NEY8 169 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 ZNF726A6NNF4 738 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 B4DSR2 109 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 LYNX1G3V0Z9 82 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 M0R233 179 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 TPST2O60704 377 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 BGLAPP02818 100 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 LYNX1P0DP58 116 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 CD79AP11912 226 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 NQO1P15559 274 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms